RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 DNMT3LQ9UJW3 386 aa20.49■□□□□ 0.87
COMMD1-208ENST00000472729 PCDHB4Q9Y5E5 795 aa20.49■□□□□ 0.87
COMMD1-208ENST00000472729 PMM2O15305 246 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 RNF40O75150 1001 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 EGFP01133 1207 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 AFPP02771 609 aaKnown RBP20.48■□□□□ 0.87
COMMD1-208ENST00000472729 RARGP13631 454 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 KIF11P52732 1056 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 ZXDBP98169 803 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 KCNH2Q12809 1159 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 DHCR24Q15392 516 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 ARHGAP17Q68EM7 881 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 HEATR6Q6AI08 1181 aaKnown RBP20.48■□□□□ 0.87
COMMD1-208ENST00000472729 TMEM270Q6UE05 265 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 NUDT18Q6ZVK8 323 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 RSRC2Q7L4I2 434 aaKnown RBP20.48■□□□□ 0.87
COMMD1-208ENST00000472729 MLKLQ8NB16 471 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 IPO9Q96P70 1041 aaKnown RBP20.48■□□□□ 0.87
COMMD1-208ENST00000472729 UBXN6Q9BZV1 441 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 LRRC4Q9HBW1 653 aa20.48■□□□□ 0.87
COMMD1-208ENST00000472729 ZFHX2Q9C0A1 2572 aaPredicted RBP20.47■□□□□ 0.87
COMMD1-208ENST00000472729 A0A1W2PQH9 124 aa20.47■□□□□ 0.87
COMMD1-208ENST00000472729 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.47■□□□□ 0.87
COMMD1-208ENST00000472729 VDRP11473 427 aa20.47■□□□□ 0.87
COMMD1-208ENST00000472729 ADH5P11766 374 aa20.47■□□□□ 0.87
COMMD1-208ENST00000472729 BCAT1P54687 386 aa20.47■□□□□ 0.87
COMMD1-208ENST00000472729 GAD2Q05329 585 aa20.47■□□□□ 0.87
COMMD1-208ENST00000472729 GAS6Q14393 721 aa20.47■□□□□ 0.87
COMMD1-208ENST00000472729 GOLGA7BQ2TAP0 167 aa20.47■□□□□ 0.87
COMMD1-208ENST00000472729 GPRIN1Q7Z2K8 1008 aa20.47■□□□□ 0.87
COMMD1-208ENST00000472729 LONP2Q86WA8 852 aa20.47■□□□□ 0.87
COMMD1-208ENST00000472729 ACDQ96AP0 544 aa20.47■□□□□ 0.87
COMMD1-208ENST00000472729 DACH1Q9UI36 760 aa20.47■□□□□ 0.87
COMMD1-208ENST00000472729 F5P12259 2224 aa20.47■□□□□ 0.87
COMMD1-208ENST00000472729 HHLA1C9JL84 531 aa20.46■□□□□ 0.87
COMMD1-208ENST00000472729 PAPSS2O95340 614 aaPredicted RBP20.46■□□□□ 0.87
COMMD1-208ENST00000472729 CYP17A1P05093 508 aa20.46■□□□□ 0.87
COMMD1-208ENST00000472729 CNR2P34972 360 aa20.46■□□□□ 0.87
COMMD1-208ENST00000472729 PLA2G4AP47712 749 aa20.46■□□□□ 0.87
COMMD1-208ENST00000472729 ANO4Q32M45 955 aa20.46■□□□□ 0.87
COMMD1-208ENST00000472729 PRR23BQ6ZRT6 265 aa20.46■□□□□ 0.87
COMMD1-208ENST00000472729 CCDC186Q7Z3E2 898 aa20.46■□□□□ 0.87
COMMD1-208ENST00000472729 PIGZQ86VD9 579 aa20.46■□□□□ 0.87
COMMD1-208ENST00000472729 PNKPQ96T60 521 aa20.46■□□□□ 0.87
COMMD1-208ENST00000472729 CYLDQ9NQC7 956 aa20.46■□□□□ 0.87
COMMD1-208ENST00000472729 GMEB2Q9UKD1 530 aa20.46■□□□□ 0.87
COMMD1-208ENST00000472729 TSPAN16Q9UKR8 245 aa20.46■□□□□ 0.87
COMMD1-208ENST00000472729 STRIP2Q9ULQ0 834 aa20.46■□□□□ 0.87
COMMD1-208ENST00000472729 CHURC1-FNTBB4DL54 471 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 TBX18O95935 607 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 PAEPP09466 180 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 FNTBP49356 437 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 TKTL1P51854 596 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 BST2Q10589 180 aaKnown RBP20.45■□□□□ 0.86
COMMD1-208ENST00000472729 KLHDC10Q6PID8 442 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 CEP68Q76N32 757 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 MIB1Q86YT6 1006 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 TRIM59Q8IWR1 403 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 SIX6OS1Q8N1H7 587 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 EHBP1Q8NDI1 1231 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 RPLP0P6Q8NHW5 317 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 NELL1Q92832 810 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 GBP4Q96PP9 640 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 NUP62CLQ9H1M0 184 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 CLSTN2Q9H4D0 955 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 FBRSL1Q9HCM7 1045 aaKnown RBP20.45■□□□□ 0.86
COMMD1-208ENST00000472729 CLIC5Q9NZA1 410 aa20.45■□□□□ 0.86
COMMD1-208ENST00000472729 SMG5Q9UPR3 1016 aaKnown RBP20.45■□□□□ 0.86
COMMD1-208ENST00000472729 NUP210Q8TEM1 1887 aaPredicted RBP20.44■□□□□ 0.86
COMMD1-208ENST00000472729 GOLGA6L22H0YM25 854 aa20.44■□□□□ 0.86
COMMD1-208ENST00000472729 XPO1O14980 1071 aaKnown RBP20.44■□□□□ 0.86
COMMD1-208ENST00000472729 APODP05090 189 aa20.44■□□□□ 0.86
COMMD1-208ENST00000472729 MARSP56192 900 aaKnown RBP20.44■□□□□ 0.86
COMMD1-208ENST00000472729 COG7P83436 770 aa20.44■□□□□ 0.86
COMMD1-208ENST00000472729 SIM2Q14190 667 aaPredicted RBP20.44■□□□□ 0.86
COMMD1-208ENST00000472729 STILQ15468 1287 aa20.44■□□□□ 0.86
COMMD1-208ENST00000472729 LY6G5CQ5SRR4 150 aa20.44■□□□□ 0.86
COMMD1-208ENST00000472729 RHBDF2Q6PJF5 856 aa20.44■□□□□ 0.86
COMMD1-208ENST00000472729 RRAGAQ7L523 313 aa20.44■□□□□ 0.86
COMMD1-208ENST00000472729 CAMKK1Q8N5S9 505 aa20.44■□□□□ 0.86
COMMD1-208ENST00000472729 EPC1Q9H2F5 836 aa20.44■□□□□ 0.86
COMMD1-208ENST00000472729 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.44■□□□□ 0.86
COMMD1-208ENST00000472729 USP3Q9Y6I4 520 aa20.44■□□□□ 0.86
COMMD1-208ENST00000472729 TICRRQ7Z2Z1 1910 aa20.44■□□□□ 0.86
COMMD1-208ENST00000472729 LILRB5O75023 590 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 ZBED1O96006 694 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 SETSIPP0DME0 302 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 KRT5P13647 590 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 EIF2DP41214 584 aaKnown RBP20.43■□□□□ 0.86
COMMD1-208ENST00000472729 MTIF2P46199 727 aaKnown RBP20.43■□□□□ 0.86
COMMD1-208ENST00000472729 SEC13P55735 322 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 GCNT1Q02742 428 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 PDE4CQ08493 712 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 C2orf27AQ580R0 203 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 NAIF1Q69YI7 327 aaPredicted RBP20.43■□□□□ 0.86
COMMD1-208ENST00000472729 HTR3DQ70Z44 454 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 FAM114A1Q8IWE2 563 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 BBS7Q8IWZ6 715 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 UBA3Q8TBC4 463 aa20.43■□□□□ 0.86
COMMD1-208ENST00000472729 RNF139Q8WU17 664 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms