RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SRSF8Q9BRL6 282 aaKnown RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 NDC1Q9BTX1 674 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 IMPG2Q9BZV3 1241 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 CTDSP1Q9GZU7 261 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 AP5M1Q9H0R1 490 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 SLC25A32Q9H2D1 315 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 CCDC68Q9H2F9 335 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 WDCPQ9H6R7 721 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 BCO1Q9HAY6 547 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 G6PC2Q9NQR9 355 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 GPRC5DQ9NZD1 345 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 NCDNQ9UBB6 729 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 PCDHA10Q9Y5I2 948 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 ALKQ9UM73 1620 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 CBFA2T3O75081 653 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 PGM1P36871 562 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 CPT1AP50416 773 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 PAPOLAP51003 745 aaKnown RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 CTXN1P60606 82 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 RAB32Q13637 225 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 SLC29A2Q14542 456 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 DGKDQ16760 1214 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 SLC5A9Q2M3M2 681 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 PRICKLE4Q2TBC4 344 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 NOMO2Q5JPE7 1267 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 HECTD3Q5T447 861 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 TRAT1Q6PIZ9 186 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 ATF7IPQ6VMQ6 1270 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 CD163Q86VB7 1156 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 CLEC10AQ8IUN9 316 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 APPL2Q8NEU8 664 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 OR14K1Q8NGZ2 314 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 GOT1L1Q8NHS2 421 aaPredicted RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 DNAJB14Q8TBM8 379 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 PHOSPHO1Q8TCT1 267 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 NETO1Q8TDF5 533 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 TP53INP1Q96A56 240 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 KATNBL1Q9H079 304 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 CXorf36Q9H7Y0 433 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 SEMA4BQ9NPR2 832 aaPredicted RBP2.94□□□□□ -1.94
XRN1-210ENST00000472697 CNNM1Q9NRU3 951 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 LANCL2Q9NS86 450 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 DKK4Q9UBT3 224 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 SEL1LQ9UBV2 794 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 CROTQ9UKG9 612 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 IRS2Q9Y4H2 1338 aa2.94□□□□□ -1.94
XRN1-210ENST00000472697 CEP170BQ9Y4F5 1589 aaPredicted RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 H7C0S8 307 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 HNRNPDLO14979 420 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 LDLRAD4O15165 306 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 CYP26A1O43174 497 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 SPRY1O43609 319 aaPredicted RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 MPOP05164 745 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 LTA4HP09960 611 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 RPL17P18621 184 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 IL11P20809 199 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 ACVR2AP27037 513 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 HSPA1LP34931 641 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 CTNNA1P35221 906 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 CLCN7P51798 805 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 ALDH18A1P54886 795 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 ITGA1P56199 1179 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 GPS1Q13098 491 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 P3H1Q32P28 736 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 PLEKHN1Q494U1 663 aaPredicted RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 VASNQ6EMK4 673 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 NAPEPLDQ6IQ20 393 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 GRHL2Q6ISB3 625 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 AACSQ86V21 672 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 TXNRD3Q86VQ6 643 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 KRTAP19-1Q8IUB9 90 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 NDUFAF2Q8N183 169 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 ANKRD53Q8N9V6 530 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 FAM71DQ8N9W8 422 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 SLC22A17Q8WUG5 538 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 ZNF480Q8WV37 535 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 SNRNP27Q8WVK2 155 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 FNBP1Q96RU3 617 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 NEU1Q99519 415 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 BTBD2Q9BX70 525 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 OPA3Q9H6K4 179 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 POLR1BQ9H9Y6 1135 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 SCPEP1Q9HB40 452 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 CHCHD3Q9NX63 227 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 SORCS3Q9UPU3 1222 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 HDAC5Q9UQL6 1122 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 FAM169AQ9Y6X4 670 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 VWDEQ8N2E2 1590 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 CXorf49A8MYA2 514 aaPredicted RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 VILLO15195 856 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 SEC31AO94979 1220 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 ZFPL1O95159 310 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 SPATA31C1P0DKV0 1188 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 ATF2P15336 505 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 TPH1P17752 444 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 FDXRP22570 491 aa2.93□□□□□ -1.94
XRN1-210ENST00000472697 EIF2DP41214 584 aaKnown RBP2.93□□□□□ -1.94
XRN1-210ENST00000472697 AARSP49588 968 aaKnown RBP eCLIP2.93□□□□□ -1.94
XRN1-210ENST00000472697 PDE6CP51160 858 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms