RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	SIX1	Q15475	284 aa	Predicted RBP	11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	PPP2R5E	Q16537	467 aa		11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	NFE2	Q16621	373 aa	Predicted RBP	11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	WDR93	Q6P2C0	686 aa		11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	PRSS55	Q6UWB4	352 aa	Predicted RBP	11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	TMCO3	Q6UWJ1	677 aa		11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	GSPT2	Q8IYD1	628 aa	Known RBP	11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ATG4A	Q8WYN0	398 aa		11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	FAM118B	Q9BPY3	351 aa		11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	EPB41L5	Q9HCM4	733 aa		11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	CNGB3	Q9NQW8	809 aa		11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	GPATCH2L	Q9NWQ4	482 aa		11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	PCDHB5	Q9Y5E4	795 aa		11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	COL4A6	Q14031	1691 aa		11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ALPK3	Q96L96	1907 aa		11.25	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ESYT3	A0FGR9	886 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	C2CD2L	O14523	706 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ERLIN1	O75477	346 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	CD48	P09326	243 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	KDELR1	P24390	212 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	CHRNA3	P32297	505 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	CDKN2B	P42772	138 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	KCNJ1	P48048	391 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	GPR15	P49685	360 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	CDH6	P55285	790 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	HDAC4	P56524	1084 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	COPS2	P61201	443 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	DYNLT1	P63172	113 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	DR1	Q01658	176 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	KRT81	Q14533	505 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	DDR2	Q16832	855 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	TFDP3	Q5H9I0	405 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	SDHAF4	Q5VUM1	108 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	TTC27	Q6P3X3	843 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	CCDC137	Q6PK04	289 aa	Known RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	KCNT2	Q6UVM3	1135 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	RSPO2	Q6UXX9	243 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ANKS3	Q6ZW76	656 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ARC	Q7LC44	396 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	MAATS1	Q7Z4T9	603 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	RFX6	Q8HWS3	928 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	IFT20	Q8IY31	132 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	C7orf61	Q8IZ16	206 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ATAD1	Q8NBU5	361 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	STKLD1	Q8NE28	680 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	SCAMP5	Q8TAC9	235 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	IFT81	Q8WYA0	676 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	RIN2	Q8WYP3	895 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	BAD	Q92934	168 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ZNF689	Q96CS4	500 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	IGSF21	Q96ID5	467 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ZNF558	Q96NG5	402 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	YME1L1	Q96TA2	773 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	NCAPG	Q9BPX3	1015 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	TRIM51	Q9BSJ1	452 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ADAM33	Q9BZ11	813 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	POPDC2	Q9HBU9	364 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	NAALADL1	Q9UQQ1	740 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	R3HDM2	Q9Y2K5	976 aa	Known RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	MRPL42	Q9Y6G3	142 aa	Known RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	PATJ	Q8NI35	1801 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	hCG_1818297	A0A087WSY0	165 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	CCDC151	A5D8V7	595 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	C3orf70	A6NLC5	250 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	BAIAP3	O94812	1187 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	TJP3	O95049	919 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	FGB	P02675	491 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	LTF	P02788	710 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	NCAM1	P13591	858 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	NOS2	P35228	1153 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	COIL	P38432	576 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	SLC5A3	P53794	718 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	PITX1	P78337	314 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	FPGS	Q05932	587 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ADCY2	Q08462	1091 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	NME3	Q13232	169 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	PPIG	Q13427	754 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	USP41	Q3LFD5	358 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	SLC25A52	Q3SY17	297 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ZC3H12A	Q5D1E8	599 aa	Known RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	SYPL2	Q5VXT5	272 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	KIAA1841	Q6NSI8	718 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	ZNF365	Q70YC5	407 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	UBE2Q1	Q7Z7E8	422 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	CCDC105	Q8IYK2	499 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	TTC9B	Q8N6N2	239 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	CMAS	Q8NFW8	434 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	SLC7A14	Q8TBB6	771 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	CASKIN2	Q8WXE0	1202 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	EDEM1	Q92611	657 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	CENPI	Q92674	756 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	HAUS1	Q96CS2	278 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	SLC2A13	Q96QE2	648 aa		11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	SNRNP25	Q9BV90	132 aa	Known RBP	11.24	□□□□□ -0.61
MRPS18B-208	ENST00000472267	VN1R3	Q9BXE9	311 aa		11.24	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms