RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 GPATCH3Q96I76 525 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 LRRC3BQ96PB8 259 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 MIPEPQ99797 713 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 CCSER2Q9H7U1 834 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 JMJD4Q9H9V9 463 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 FBRSQ9HAH7 460 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 FBRSL1Q9HCM7 1045 aaKnown RBP4.81□□□□□ -1.64
LMNB1-205ENST00000472034 CHST7Q9NS84 486 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 GDE1Q9NZC3 331 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 UBP1Q9NZI7 540 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 CACNG4Q9UBN1 327 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 KCNH3Q9ULD8 1083 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.81□□□□□ -1.64
LMNB1-205ENST00000472034 PCDHGB7Q9Y5F8 929 aa4.81□□□□□ -1.64
LMNB1-205ENST00000472034 NID2Q14112 1375 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 WDR27A2RRH5 827 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 CLEC18AA5D8T8 446 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 PRR19A6NJB7 356 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 TMEM110-MUSTN1A8MSY1 372 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 HEPACAM2A8MVW5 462 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 FAM25EA8MYX2 175 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 H0YHG0 523 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 GOLGA6L22H0YM25 854 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 FOXP2O15409 715 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 RRP8O43159 456 aaKnown RBP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 GJB3O75712 270 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 HTR3BO95264 441 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 EGFP01133 1207 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 IMPDH2P12268 514 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 HLA-EP13747 358 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 CD53P19397 219 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 ITGB7P26010 798 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 U2AF2P26368 475 aaKnown RBP eCLIP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 ERCC5P28715 1186 aaPredicted RBP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 STIP1P31948 543 aaKnown RBP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 ETV3P41162 512 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 OR1G1P47890 313 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 CLK1P49759 484 aaKnown RBP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 GTF2A1P52655 376 aaPredicted RBP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 NLRP11P59045 1033 aaKnown RBP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 RHDQ02161 417 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 DDX10Q13206 875 aaKnown RBP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 GNL2Q13823 731 aaKnown RBP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 PDIA5Q14554 519 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 KARSQ15046 597 aaKnown RBP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 C2orf27AQ580R0 203 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 ODR4Q5SWX8 454 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 PRAMEF13Q5VWM6 474 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 KIAA1614Q5VZ46 1190 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 LETMD1Q6P1Q0 360 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 PDXDC1Q6P996 788 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 SLC23A3Q6PIS1 610 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 CLEC18BQ6UXF7 455 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 CCDC91Q7Z6B0 441 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 SYT12Q8IV01 421 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 DEFB119Q8N690 84 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 METTL13Q8N6R0 699 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 CLEC18CQ8NCF0 446 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 FBXO27Q8NI29 283 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 ENOX1Q8TC92 643 aaKnown RBP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 CSGALNACT1Q8TDX6 532 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 FNBP1Q96RU3 617 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 CLSTN3Q9BQT9 956 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 TGIF2Q9GZN2 237 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.8□□□□□ -1.641e-9■□□□□ 9.9
LMNB1-205ENST00000472034 PRKRIP1Q9H875 184 aaPredicted RBP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 CAPN10Q9HC96 672 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 CASS4Q9NQ75 786 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 CGNQ9P2M7 1197 aaKnown RBP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 REV1Q9UBZ9 1251 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 TJP2Q9UDY2 1190 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 USP25Q9UHP3 1055 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 PCDHB14Q9Y5E9 798 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 CORINQ9Y5Q5 1042 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 HEMK1Q9Y5R4 338 aaPredicted RBP4.8□□□□□ -1.64
LMNB1-205ENST00000472034 PTPRDP23468 1912 aa4.8□□□□□ -1.64
LMNB1-205ENST00000472034 PDZD2O15018 2839 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 HIVEP1P15822 2718 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 MOSPD3O75425 235 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 MTA2O94776 668 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 ATE1O95260 518 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 C22orf31O95567 290 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 APBB3O95704 486 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 MSL3P1P0C860 447 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 ITGB5P18084 799 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 PSMA3P25788 255 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 ELAVL4P26378 380 aaKnown RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 EIF2B5Q13144 721 aaKnown RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 HNRNPDQ14103 355 aaKnown RBP4.79□□□□□ -1.64
LMNB1-205ENST00000472034 DMC1Q14565 340 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 NKG7Q16617 165 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 SLC35G1Q2M3R5 365 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 HS1BP3Q53T59 392 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 SFRP5Q5T4F7 317 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 ANO7Q6IWH7 933 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 C16orf87Q6PH81 154 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 DHRS13Q6UX07 377 aa4.79□□□□□ -1.64
LMNB1-205ENST00000472034 GK5Q6ZS86 529 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms