RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 NTSR1P30989 418 aa21.03■□□□□ 0.96
CCDC78-208ENST00000471861 CCNI2Q6ZMN8 369 aaPredicted RBP21.03■□□□□ 0.96
CCDC78-208ENST00000471861 HS2ST1Q7LGA3 356 aa21.03■□□□□ 0.96
CCDC78-208ENST00000471861 TMEM25Q86YD3 366 aa21.03■□□□□ 0.96
CCDC78-208ENST00000471861 NAXDQ8IW45 347 aa21.03■□□□□ 0.96
CCDC78-208ENST00000471861 SYCP3Q8IZU3 236 aa21.03■□□□□ 0.96
CCDC78-208ENST00000471861 BBC3Q96PG8 261 aaPredicted RBP21.03■□□□□ 0.96
CCDC78-208ENST00000471861 MMS19Q96T76 1030 aa21.03■□□□□ 0.96
CCDC78-208ENST00000471861 TRIM9Q9C026 710 aa21.03■□□□□ 0.96
CCDC78-208ENST00000471861 SPHK2Q9NRA0 654 aa21.03■□□□□ 0.96
CCDC78-208ENST00000471861 DEC1Q9P2X7 70 aa21.03■□□□□ 0.96
CCDC78-208ENST00000471861 STARD13Q9Y3M8 1113 aa21.03■□□□□ 0.96
CCDC78-208ENST00000471861 PRPF6O94906 941 aaKnown RBP21.02■□□□□ 0.96
CCDC78-208ENST00000471861 TNNC2P02585 160 aa21.02■□□□□ 0.96
CCDC78-208ENST00000471861 SYPP08247 313 aa21.02■□□□□ 0.96
CCDC78-208ENST00000471861 SLC14A1Q13336 389 aa21.02■□□□□ 0.96
CCDC78-208ENST00000471861 GLIS3Q8NEA6 775 aa21.02■□□□□ 0.96
CCDC78-208ENST00000471861 MDM1Q8TC05 714 aa21.02■□□□□ 0.96
CCDC78-208ENST00000471861 IPO4Q8TEX9 1081 aaKnown RBP21.02■□□□□ 0.96
CCDC78-208ENST00000471861 DUSP9Q99956 384 aaKnown RBP21.02■□□□□ 0.96
CCDC78-208ENST00000471861 B3GNT5Q9BYG0 378 aa21.02■□□□□ 0.96
CCDC78-208ENST00000471861 CCSER2Q9H7U1 834 aa21.02■□□□□ 0.96
CCDC78-208ENST00000471861 PCDHB13Q9Y5F0 798 aa21.02■□□□□ 0.96
CCDC78-208ENST00000471861 APC2O95996 2303 aa21.02■□□□□ 0.96
CCDC78-208ENST00000471861 CBFA2T3O75081 653 aa21.01■□□□□ 0.95
CCDC78-208ENST00000471861 TACC1O75410 805 aa21.01■□□□□ 0.95
CCDC78-208ENST00000471861 CD2BP2O95400 341 aaKnown RBP21.01■□□□□ 0.95
CCDC78-208ENST00000471861 PTPN1P18031 435 aaKnown RBP21.01■□□□□ 0.95
CCDC78-208ENST00000471861 YWHAQP27348 245 aa21.01■□□□□ 0.95
CCDC78-208ENST00000471861 GNL1P36915 607 aaPredicted RBP21.01■□□□□ 0.95
CCDC78-208ENST00000471861 DUOXA2Q1HG44 320 aa21.01■□□□□ 0.95
CCDC78-208ENST00000471861 PLEKHG6Q3KR16 790 aa21.01■□□□□ 0.95
CCDC78-208ENST00000471861 BTBD8Q5XKL5 378 aa21.01■□□□□ 0.95
CCDC78-208ENST00000471861 SLCO6A1Q86UG4 719 aa21.01■□□□□ 0.95
CCDC78-208ENST00000471861 FBXO32Q969P5 355 aa21.01■□□□□ 0.95
CCDC78-208ENST00000471861 ZNF419Q96HQ0 510 aaPredicted RBP21.01■□□□□ 0.95
CCDC78-208ENST00000471861 TMX3Q96JJ7 454 aa21.01■□□□□ 0.95
CCDC78-208ENST00000471861 GABRG3Q99928 467 aa21.01■□□□□ 0.95
CCDC78-208ENST00000471861 ELOVL4Q9GZR5 314 aa21.01■□□□□ 0.95
CCDC78-208ENST00000471861 CCDC86Q9H6F5 360 aaKnown RBP21.01■□□□□ 0.95
CCDC78-208ENST00000471861 GREM1O60565 184 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 ZNF217O75362 1048 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 CST3P01034 146 aaPredicted RBP21■□□□□ 0.95
CCDC78-208ENST00000471861 IDEP14735 1019 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 MAOBP27338 520 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 GRIK2Q13002 908 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 ALCAMQ13740 583 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 ANO4Q32M45 955 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 TRAPPC11Q7Z392 1133 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 WDR49Q8IV35 697 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 NUP93Q8N1F7 819 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 PDZD8Q8NEN9 1154 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 OR6B3Q8NGW1 331 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 SCAMP5Q8TAC9 235 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 OVCA2Q8WZ82 227 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 KCNK16Q96T55 309 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 SNX25Q9H3E2 840 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 CHORDC1Q9UHD1 332 aaPredicted RBP21■□□□□ 0.95
CCDC78-208ENST00000471861 FBXO2Q9UK22 296 aaPredicted RBP21■□□□□ 0.95
CCDC78-208ENST00000471861 SH3BP1Q9Y3L3 701 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 RAD54BQ9Y620 910 aa21■□□□□ 0.95
CCDC78-208ENST00000471861 PRRT4C9JH25 899 aa20.99■□□□□ 0.95
CCDC78-208ENST00000471861 PGFP49763 221 aa20.99■□□□□ 0.95
CCDC78-208ENST00000471861 HECTD3Q5T447 861 aa20.99■□□□□ 0.95
CCDC78-208ENST00000471861 SNX30Q5VWJ9 437 aa20.99■□□□□ 0.95
CCDC78-208ENST00000471861 TOGARAM2Q6ZUX3 1019 aa20.99■□□□□ 0.95
CCDC78-208ENST00000471861 SV2BQ7L1I2 683 aa20.99■□□□□ 0.95
CCDC78-208ENST00000471861 CHPFQ8IZ52 775 aa20.99■□□□□ 0.95
CCDC78-208ENST00000471861 B3GALNT2Q8NCR0 500 aa20.99■□□□□ 0.95
CCDC78-208ENST00000471861 MRGPRX1Q96LB2 322 aa20.99■□□□□ 0.95
CCDC78-208ENST00000471861 DNAJC17Q9NVM6 304 aaKnown RBP20.99■□□□□ 0.95
CCDC78-208ENST00000471861 RAXQ9Y2V3 346 aa20.99■□□□□ 0.95
CCDC78-208ENST00000471861 R3HCC1Q9Y3T6 440 aaKnown RBP20.99■□□□□ 0.95
CCDC78-208ENST00000471861 ACACAQ13085 2346 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 PTPRBP23467 1997 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 A0A087X0B3 334 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 ZNF233A6NK53 670 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 ZDHHC11BP0C7U3 371 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 IRF1P10914 325 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 HOXD13P35453 343 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 TUBP50607 506 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 SLC5A3P53794 718 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 RRAGBQ5VZM2 374 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 GRAMD4Q6IC98 578 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 GLRX5Q86SX6 157 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 RGL4Q8IZJ4 473 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 HNRNPLLQ8WVV9 542 aaKnown RBP20.98■□□□□ 0.95
CCDC78-208ENST00000471861 CLIC6Q96NY7 704 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 FAM124BQ9H5Z6 455 aaPredicted RBP20.98■□□□□ 0.95
CCDC78-208ENST00000471861 CACNA2D2Q9NY47 1150 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 IL37Q9NZH6 218 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 HSPBP1Q9NZL4 362 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 GMIPQ9P107 970 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 PCOLCE2Q9UKZ9 415 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 PCDHB9Q9Y5E1 797 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 CLIC4Q9Y696 253 aa20.98■□□□□ 0.95
CCDC78-208ENST00000471861 KIAA0391O15091 583 aaKnown RBP20.97■□□□□ 0.95
CCDC78-208ENST00000471861 CACNG3O60359 315 aa20.97■□□□□ 0.95
CCDC78-208ENST00000471861 RTN3O95197 1032 aaPredicted RBP20.97■□□□□ 0.95
CCDC78-208ENST00000471861 PREPLQ4J6C6 727 aaPredicted RBP20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms