RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 DPYSL4O14531 572 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 ZBED1O96006 694 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 GLUD1P00367 558 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 ADH1AP07327 375 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 ABCB4P21439 1286 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 CYLC1P35663 651 aaPredicted RBP10.39□□□□□ -0.75
SF3A1-207ENST00000471342 GRIK1P39086 918 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 TUFMP49411 452 aaKnown RBP10.39□□□□□ -0.75
SF3A1-207ENST00000471342 ATXN1P54253 815 aaKnown RBP10.39□□□□□ -0.75
SF3A1-207ENST00000471342 GPC5P78333 572 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 TAF10Q12962 218 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 MGAT5BQ3V5L5 792 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 C10orf76Q5T2E6 689 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 DAB2IPQ5VWQ8 1189 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 NYAP1Q6ZVC0 841 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 RTL10Q7L3V2 364 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 ERICH1Q86X53 443 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 SCN4BQ8IWT1 228 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 EMC1Q8N766 993 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 TCEAL4Q96EI5 215 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 NPY6RQ99463 290 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 MED10Q9BTT4 135 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 EMILIN2Q9BXX0 1053 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 MIS12Q9H081 205 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 RNF38Q9H0F5 515 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 PLEKHA4Q9H4M7 779 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 WDR6Q9NNW5 1121 aaKnown RBP10.39□□□□□ -0.75
SF3A1-207ENST00000471342 CNGB3Q9NQW8 809 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 MAN1C1Q9NR34 630 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 ASNSD1Q9NWL6 643 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 COMMD8Q9NX08 183 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 MTMR10Q9NXD2 777 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 GMIPQ9P107 970 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 HESX1Q9UBX0 185 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 CNOT8Q9UFF9 292 aaKnown RBP10.39□□□□□ -0.75
SF3A1-207ENST00000471342 NAALADL1Q9UQQ1 740 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 PAXBP1Q9Y5B6 917 aa10.39□□□□□ -0.75
SF3A1-207ENST00000471342 A0A1W2PQH9 124 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 GFRA2O00451 464 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 TRIM66O15016 1216 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 BUB1BO60566 1050 aaPredicted RBP10.38□□□□□ -0.75
SF3A1-207ENST00000471342 GRAP2O75791 330 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 TBX18O95935 607 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 OAS1P00973 400 aaKnown RBP10.38□□□□□ -0.75
SF3A1-207ENST00000471342 LCP1P13796 627 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 IL1R2P27930 398 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 NSFP46459 744 aaKnown RBP10.38□□□□□ -0.75
SF3A1-207ENST00000471342 BSPRYQ5W0U4 402 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 TXNRD3NBQ6F5E7 133 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 MSANTD2Q6P1R3 559 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 DENND5BQ6ZUT9 1274 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 TPCN2Q8NHX9 752 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 RFFLQ8WZ73 363 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 IRGQQ8WZA9 623 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 SLC39A13Q96H72 371 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 LRRC3BQ96PB8 259 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 PEBP4Q96S96 227 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 CDX2Q99626 313 aaPredicted RBP10.38□□□□□ -0.75
SF3A1-207ENST00000471342 SEPT5Q99719 369 aaPredicted RBP10.38□□□□□ -0.75
SF3A1-207ENST00000471342 NSUN3Q9H649 340 aaKnown RBP10.38□□□□□ -0.75
SF3A1-207ENST00000471342 TLE6Q9H808 572 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.38□□□□□ -0.75
SF3A1-207ENST00000471342 TRMT1Q9NXH9 659 aaKnown RBP10.38□□□□□ -0.75
SF3A1-207ENST00000471342 DOCK6Q96HP0 2047 aa10.38□□□□□ -0.75
SF3A1-207ENST00000471342 CCL16O15467 120 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 CLSTN1O94985 981 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 MOCS3O95396 460 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 IGLV3-27P01718 113 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 GLI1P08151 1106 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 MYBL1P10243 752 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 GJA1P17302 382 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 ACADSBP45954 432 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 PEX5P50542 639 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 ARSEP51690 589 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 HDAC4P56524 1084 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 TAS2R40P59535 323 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 RPL10AP62906 217 aaKnown RBP10.37□□□□□ -0.75
SF3A1-207ENST00000471342 STXBP5Q5T5C0 1151 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 ZNF697Q5TEC3 545 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 ANKRD54Q6NXT1 300 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 DEFB106AQ8N104 65 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 NIPA2Q8N8Q9 360 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 SHKBP1Q8TBC3 707 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 MICAL1Q8TDZ2 1067 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 FNIP1Q8TF40 1166 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 RXFP2Q8WXD0 754 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 MYLIPQ8WY64 445 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 SUSD6Q92537 303 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 ANP32BQ92688 251 aaKnown RBP10.37□□□□□ -0.75
SF3A1-207ENST00000471342 CASP10Q92851 521 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 ZNF653Q96CK0 615 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 RSPRY1Q96DX4 576 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 MYEOVQ96EZ4 313 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 PGAP3Q96FM1 320 aaPredicted RBP10.37□□□□□ -0.75
SF3A1-207ENST00000471342 ZSWIM3Q96MP5 696 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 FAM161BQ96MY7 647 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 WDR24Q96S15 920 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 CDCA3Q99618 268 aaPredicted RBP10.37□□□□□ -0.75
SF3A1-207ENST00000471342 NUP85Q9BW27 656 aa10.37□□□□□ -0.75
SF3A1-207ENST00000471342 PRKD2Q9BZL6 878 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms