RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 MOSPD3O75425 235 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 RNF8O76064 485 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 ZBED1O96006 694 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 APEHP13798 732 aaKnown RBP1.76□□□□□ -2.13
UBXN4-207ENST00000471246 CREB1P16220 341 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 ZKSCAN1P17029 563 aaPredicted RBP1.76□□□□□ -2.13
UBXN4-207ENST00000471246 PEX2P28328 305 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 PRKAR1BP31321 381 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 MMP13P45452 471 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 DIO1P49895 249 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 CPT1AP50416 773 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 PGDP52209 483 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 TIRAPP58753 221 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 STK3Q13188 491 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 ARHGEF7Q14155 803 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 GRM3Q14832 879 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 LARS2Q15031 903 aaKnown RBP1.76□□□□□ -2.13
UBXN4-207ENST00000471246 CNGA2Q16280 664 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 ZNF750Q32MQ0 723 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 Q4G0T1 1027 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 AWAT1Q58HT5 328 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 RNF220Q5VTB9 566 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 PPP4R4Q6NUP7 873 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 CCDC149Q6ZUS6 474 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 SESTD1Q86VW0 696 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 FAM156AQ8NDB6 213 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 MAFAQ8NHW3 353 aaPredicted RBP1.76□□□□□ -2.13
UBXN4-207ENST00000471246 PNISRQ8TF01 805 aaKnown RBP1.76□□□□□ -2.13
UBXN4-207ENST00000471246 ZBTB9Q96C00 473 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 ZBTB45Q96K62 511 aaPredicted RBP1.76□□□□□ -2.13
UBXN4-207ENST00000471246 FCRL4Q96PJ5 515 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 FYTTD1Q96QD9 318 aaKnown RBP1.76□□□□□ -2.13
UBXN4-207ENST00000471246 FAM118BQ9BPY3 351 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 TRIM5Q9C035 493 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 SPRTNQ9H040 489 aaPredicted RBP1.76□□□□□ -2.13
UBXN4-207ENST00000471246 VPS16Q9H269 839 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 BHMT2Q9H2M3 363 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 DHX36Q9H2U1 1008 aaKnown RBP1.76□□□□□ -2.13
UBXN4-207ENST00000471246 SNX15Q9NRS6 342 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 TRNAU1APQ9NX07 287 aaKnown RBP1.76□□□□□ -2.13
UBXN4-207ENST00000471246 TUBA8Q9NY65 449 aaPredicted RBP1.76□□□□□ -2.13
UBXN4-207ENST00000471246 TFCP2L1Q9NZI6 479 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 COL20A1Q9P218 1284 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 OGDHLQ9ULD0 1010 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 RIMKLBQ9ULI2 386 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 TPCN1Q9ULQ1 816 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 SCAF8Q9UPN6 1271 aaKnown RBP1.76□□□□□ -2.13
UBXN4-207ENST00000471246 USP22Q9UPT9 525 aa1.76□□□□□ -2.13
UBXN4-207ENST00000471246 TTC3P53804 2025 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 CYP2D7A0A087X1C5 515 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 AQP7P3A6NL99 342 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 GOLIM4O00461 696 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 EXOC5O00471 708 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 ADAM10O14672 748 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 PPEF2O14830 753 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 DSCR3O14972 297 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 TMPRSS11DO60235 418 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 MAP4K4O95819 1239 aaPredicted RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 BMP15O95972 392 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 MT-CO3P00414 261 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 HRGP04196 525 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 IGKV2-30P06310 120 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 PARP1P09874 1014 aaKnown RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 TXNP10599 105 aaKnown RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 MYF5P13349 255 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 PHKG2P15735 406 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 TPH1P17752 444 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 ATP5F1P24539 256 aaPredicted RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 IL1R2P27930 398 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 RBL1P28749 1068 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 NTSR1P30989 418 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 MCM5P33992 734 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 CARSP49589 748 aaKnown RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 COPB1P53618 953 aaKnown RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 FAM193AP78312 1265 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 FMO1Q01740 532 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 GALEQ14376 348 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 SLC29A2Q14542 456 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 GBX1Q14549 363 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 KCNB1Q14721 858 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 KCNAB1Q14722 419 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 DAZAP2Q15038 168 aaPredicted RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 NPY5RQ15761 445 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 KIAA0753Q2KHM9 967 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 DENND2CQ68D51 928 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 DARS2Q6PI48 645 aaKnown RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 TMEM65Q6PI78 240 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 ZNF813Q6ZN06 617 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 DCDC5Q6ZRR9 648 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 USP49Q70CQ1 688 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 CHST15Q7LFX5 561 aaPredicted RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 SRGAP1Q7Z6B7 1085 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 RAB11FIP4Q86YS3 637 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 YAF2Q8IY57 180 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 MYO1HQ8N1T3 1032 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 METTL25Q8N6Q8 603 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 PRSS3P2Q8NHM4 247 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 OSR1Q8TAX0 266 aaPredicted RBP1.75□□□□□ -2.13
UBXN4-207ENST00000471246 ADAMTS18Q8TE60 1221 aa1.75□□□□□ -2.13
UBXN4-207ENST00000471246 PIGOQ8TEQ8 1089 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms