RNA–Protein interactions for RNA: ENST00000471047.1

CLK2-204, Transcript of CDC like kinase 2, humanhuman

TSL 3

Gene CLK2, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-204ENST00000471047 SMARCD1Q96GM5 515 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 FUBP3Q96I24 572 aaKnown RBP eCLIP10.35□□□□□ -0.75
CLK2-204ENST00000471047 BTBD6Q96KE9 485 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 RPGRIP1Q96KN7 1286 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 B3GALT6Q96L58 329 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 MED10Q9BTT4 135 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 LMAN2LQ9H0V9 348 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 SYNCQ9H7C4 482 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 PNPLA8Q9NP80 782 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 ST7Q9NRC1 585 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 KRT82Q9NSB4 513 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 SPG21Q9NZD8 308 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 TMEM59LQ9UK28 342 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 USP15Q9Y4E8 981 aaPredicted RBP10.35□□□□□ -0.75
CLK2-204ENST00000471047 BACE2Q9Y5Z0 518 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 MRFAP1Q9Y605 127 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 SAR1BQ9Y6B6 198 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 PLXNA3P51805 1871 aa10.35□□□□□ -0.75
CLK2-204ENST00000471047 EPG5Q9HCE0 2579 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 MIF4GDA9UHW6 222 aaKnown RBP10.34□□□□□ -0.75
CLK2-204ENST00000471047 MYO1FO00160 1098 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 CES2O00748 559 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 DDX3YO15523 660 aaKnown RBP10.34□□□□□ -0.75
CLK2-204ENST00000471047 SOD2P04179 222 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 OR4Q2P0C623 313 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 KRT3P12035 628 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 TCP1P17987 556 aaKnown RBP10.34□□□□□ -0.75
CLK2-204ENST00000471047 BDNFP23560 247 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 DNAJB1P25685 340 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 MAN1A1P33908 653 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 RFC1P35251 1148 aaPredicted RBP10.34□□□□□ -0.75
CLK2-204ENST00000471047 PPM1AP35813 382 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 SLC1A1P43005 524 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 ID4P47928 161 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 MAP3K7CLP57077 242 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 SLC6A3Q01959 620 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 OGDHQ02218 1023 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 SMARCB1Q12824 385 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 NFE2Q16621 373 aaPredicted RBP10.34□□□□□ -0.75
CLK2-204ENST00000471047 SLC39A12Q504Y0 691 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 SPOUT1Q5T280 376 aaKnown RBP10.34□□□□□ -0.75
CLK2-204ENST00000471047 FAM102AQ5T9C2 384 aaPredicted RBP10.34□□□□□ -0.75
CLK2-204ENST00000471047 SLC8B1Q6J4K2 584 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 RSPO2Q6UXX9 243 aaPredicted RBP10.34□□□□□ -0.75
CLK2-204ENST00000471047 SLC26A9Q7LBE3 791 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 DDX53Q86TM3 631 aaKnown RBP10.34□□□□□ -0.75
CLK2-204ENST00000471047 SCUBE3Q8IX30 993 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 GPR65Q8IYL9 337 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 SCML4Q8N228 414 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 JOSD2Q8TAC2 188 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 PIWIL1Q96J94 861 aaKnown RBP10.34□□□□□ -0.75
CLK2-204ENST00000471047 MCEEQ96PE7 176 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 OSBPL9Q96SU4 736 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 KCNK16Q96T55 309 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 SELENOOQ9BVL4 669 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 HERC2P3Q9BVR0 1158 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 RHOBTB2Q9BYZ6 727 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 IRF2BPLQ9H1B7 796 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 DMAP1Q9NPF5 467 aaPredicted RBP10.34□□□□□ -0.75
CLK2-204ENST00000471047 METTL5Q9NRN9 209 aaKnown RBP10.34□□□□□ -0.75
CLK2-204ENST00000471047 MTRRQ9UBK8 725 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 IP6K2Q9UHH9 426 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 CDC23Q9UJX2 597 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 AMFRQ9UKV5 643 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 PACSIN2Q9UNF0 486 aaPredicted RBP10.34□□□□□ -0.75
CLK2-204ENST00000471047 HYOU1Q9Y4L1 999 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 ZFHX4Q86UP3 3567 aa10.34□□□□□ -0.75
CLK2-204ENST00000471047 EP300Q09472 2414 aaPredicted RBP10.33□□□□□ -0.76
CLK2-204ENST00000471047 GOLGA8SH3BPF8 625 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 PIK3R2O00459 728 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 GALR2O43603 387 aaPredicted RBP10.33□□□□□ -0.76
CLK2-204ENST00000471047 VNN2O95498 520 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 GLP2RO95838 553 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 COMTP21964 271 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 CTNNA2P26232 953 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 CTNNA1P35221 906 aaKnown RBP10.33□□□□□ -0.76
CLK2-204ENST00000471047 MAGEA11P43364 429 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 PEX5P50542 639 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 RBM10P98175 930 aaKnown RBP10.33□□□□□ -0.76
CLK2-204ENST00000471047 DSG1Q02413 1049 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 ADCY1Q08828 1119 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 GPR17Q13304 367 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 PIGHQ14442 188 aaPredicted RBP10.33□□□□□ -0.76
CLK2-204ENST00000471047 ACAP1Q15027 740 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 RPS6KA1Q15418 735 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 OR6B2Q6IFH4 312 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 TRNP1Q6NT89 227 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 DCUN1D2Q6PH85 259 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 VSTM1Q6UX27 236 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 RBM23Q86U06 439 aaKnown RBP10.33□□□□□ -0.76
CLK2-204ENST00000471047 CPNE8Q86YQ8 564 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 SPATA2LQ8IUW3 424 aaPredicted RBP10.33□□□□□ -0.76
CLK2-204ENST00000471047 EFHBQ8N7U6 833 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 SPPL2BQ8TCT7 592 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 TMEM169Q96HH4 297 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 AAASQ9NRG9 546 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 STK39Q9UEW8 545 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 PCDHA3Q9Y5H8 950 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 CACNA1GO43497 2377 aa10.33□□□□□ -0.76
CLK2-204ENST00000471047 TPRP12270 2363 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms