RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 WASF3Q9UPY6 502 aa9.64□□□□□ -0.87
SF3A1-206ENST00000471037 PTPRJQ12913 1337 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 GOLGA8IPA6NC78 632 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 GOLGA8JA6NMD2 632 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 LEFTY2O00292 366 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 GIPC1O14908 333 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 KHNYNO15037 678 aaKnown RBP9.63□□□□□ -0.87
SF3A1-206ENST00000471037 SLC16A3O15427 465 aaKnown RBP9.63□□□□□ -0.87
SF3A1-206ENST00000471037 EXOC3O60645 756 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 ATP2C2O75185 946 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 CYP17A1P05093 508 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 EPB41P11171 864 aaKnown RBP9.63□□□□□ -0.87
SF3A1-206ENST00000471037 CHRM1P11229 460 aaPredicted RBP9.63□□□□□ -0.87
SF3A1-206ENST00000471037 CEACAM1P13688 526 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 CDK11BP21127 795 aaKnown RBP9.63□□□□□ -0.87
SF3A1-206ENST00000471037 WARSP23381 471 aaKnown RBP9.63□□□□□ -0.87
SF3A1-206ENST00000471037 LMO2P25791 158 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 PPP3CCP48454 512 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 MARSP56192 900 aaKnown RBP9.63□□□□□ -0.87
SF3A1-206ENST00000471037 USP46P62068 366 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 PSMC1P62191 440 aaKnown RBP9.63□□□□□ -0.87
SF3A1-206ENST00000471037 NOP14P78316 857 aaKnown RBP9.63□□□□□ -0.87
SF3A1-206ENST00000471037 MRPS21P82921 87 aaKnown RBP9.63□□□□□ -0.87
SF3A1-206ENST00000471037 ZNF252P-AS1Q0IIN9 211 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 SURF1Q15526 300 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 HSF5Q4G112 596 aaPredicted RBP9.63□□□□□ -0.87
SF3A1-206ENST00000471037 C2orf27AQ580R0 203 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 SH3PXD2AQ5TCZ1 1133 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 ANO7Q6IWH7 933 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 SARM1Q6SZW1 724 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 UNQ6494/PRO21346Q6UXR6 183 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 CYP2U1Q7Z449 544 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 TTC16Q8NEE8 873 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 MDGA1Q8NFP4 955 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 MYCBPAPQ8TBZ2 947 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 PCED1BQ96HM7 432 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 HPDLQ96IR7 371 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 TMEM121BQ9BXQ6 578 aaPredicted RBP9.63□□□□□ -0.87
SF3A1-206ENST00000471037 KIAA1586Q9HCI6 787 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 HSPBP1Q9NZL4 362 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 TRPM5Q9NZQ8 1165 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 EVLQ9UI08 416 aaPredicted RBP9.63□□□□□ -0.87
SF3A1-206ENST00000471037 FRMD4BQ9Y2L6 1034 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 ATG2BQ96BY7 2078 aa9.63□□□□□ -0.87
SF3A1-206ENST00000471037 A0A0A0MRY4 1105 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 ZNF840PA6NDX5 716 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 PATE3B3GLJ2 98 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 KCNJ18B7U540 433 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 CDX4O14627 284 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-206ENST00000471037 SLC9A3R1O14745 358 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-206ENST00000471037 TRIM66O15016 1216 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 MAPK13O15264 365 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 ALDH1A2O94788 518 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 OAS1P00973 400 aaKnown RBP9.62□□□□□ -0.87
SF3A1-206ENST00000471037 TNNC2P02585 160 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 TPM2P07951 284 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 BCKDHBP21953 392 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 BDNFP23560 247 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 ANXA13P27216 316 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 PSMC2P35998 433 aaKnown RBP9.62□□□□□ -0.87
SF3A1-206ENST00000471037 GRIK1P39086 918 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 P2RY2P41231 377 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 CYP2J2P51589 502 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 KCNJ12Q14500 433 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 CCDC40Q4G0X9 1142 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 TCP11X2Q5H9J9 407 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 SPDYCQ5MJ68 293 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 CEP135Q66GS9 1140 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 LMBRD2Q68DH5 695 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-206ENST00000471037 TMEM92Q6UXU6 159 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 IRF2BP1Q8IU81 584 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 WDR49Q8IV35 697 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 ADGRG2Q8IZP9 1017 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 IL17RCQ8NAC3 791 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 KDF1Q8NAX2 398 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-206ENST00000471037 OR5B17Q8NGF7 314 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 C8orf48Q96LL4 319 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 PNKPQ96T60 521 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 PCIF1Q9H4Z3 704 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 METTL14Q9HCE5 456 aaKnown RBP9.62□□□□□ -0.87
SF3A1-206ENST00000471037 LIMA1Q9UHB6 759 aaKnown RBP9.62□□□□□ -0.87
SF3A1-206ENST00000471037 INVSQ9Y283 1065 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 R3HCC1Q9Y3T6 440 aaKnown RBP9.62□□□□□ -0.87
SF3A1-206ENST00000471037 PTPRDP23468 1912 aa9.62□□□□□ -0.87
SF3A1-206ENST00000471037 NUP205Q92621 2012 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 TMEM8BA6NDV4 472 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 ANTXRLA6NF34 631 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 ZNF233A6NK53 670 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 C1QTNF9BB2RNN3 333 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 F8VP50 259 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 TNFRSF10BO14763 440 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 CBFA2T2O43439 604 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 TACC1O75410 805 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 KAT7O95251 611 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 SERPINC1P01008 464 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 TPM3P06753 285 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 FAM163BP0C2L3 166 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 C1QTNF9P0C862 333 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 ATP1A3P13637 1013 aa9.61□□□□□ -0.87
SF3A1-206ENST00000471037 HNRNPLP14866 589 aaKnown RBP eCLIP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms