RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 PBRM1Q86U86 1689 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 ZMYM4Q5VZL5 1548 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 AATKQ6ZMQ8 1374 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 SMG6Q86US8 1419 aaKnown RBP6.2□□□□□ -1.42
RBM39-227ENST00000470563 OTOL1A6NHN0 477 aaPredicted RBP6.2□□□□□ -1.42
RBM39-227ENST00000470563 ZAR1LA6NP61 321 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 HOXC11O43248 304 aaPredicted RBP6.2□□□□□ -1.42
RBM39-227ENST00000470563 RASAL1O95294 804 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 CHRM3P20309 590 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 PRKAR1BP31321 381 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 HIBADHP31937 336 aaKnown RBP6.2□□□□□ -1.42
RBM39-227ENST00000470563 PGDP52209 483 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 ATXN1P54253 815 aaKnown RBP6.2□□□□□ -1.42
RBM39-227ENST00000470563 PRKAG1P54619 331 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 TIRAPP58753 221 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 ACTR2P61160 394 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 SCAPQ12770 1279 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 SPDYE7PQ495Y7 208 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 RBM20Q5T481 1227 aaKnown RBP6.2□□□□□ -1.42
RBM39-227ENST00000470563 TEDDM1Q5T9Z0 273 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 ARHGAP40Q5TG30 622 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 RGS7BPQ6MZT1 257 aaPredicted RBP6.2□□□□□ -1.42
RBM39-227ENST00000470563 BBS12Q6ZW61 710 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 FTSJ3Q8IY81 847 aaKnown RBP6.2□□□□□ -1.42
RBM39-227ENST00000470563 USP38Q8NB14 1042 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 NSUN7Q8NE18 718 aaKnown RBP6.2□□□□□ -1.42
RBM39-227ENST00000470563 NACC2Q96BF6 587 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 FAM136AQ96C01 138 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 MYEOVQ96EZ4 313 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 ZSWIM1Q9BR11 485 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 FAM167BQ9BTA0 163 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 MLXIPQ9HAP2 919 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 TMLHEQ9NVH6 421 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 TRPM5Q9NZQ8 1165 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 RAPGEFL1Q9UHV5 662 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 RPRD2Q5VT52 1461 aaKnown RBP6.2□□□□□ -1.42
RBM39-227ENST00000470563 E9PCH4 1651 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 TOPBP1Q92547 1522 aa6.2□□□□□ -1.42
RBM39-227ENST00000470563 ROCK1Q13464 1354 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 KTN1Q86UP2 1357 aaKnown RBP6.19□□□□□ -1.42
RBM39-227ENST00000470563 FHOD3Q2V2M9 1422 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 CCDC196A0A1B0GTZ2 297 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 RRN3P2A6NIE6 340 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 TMEM200CA6NKL6 621 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 A8MVJ9 347 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 J3KRW8 73 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 EYA2O00167 538 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 FCHO1O14526 889 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 LPXNO60711 386 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 TFRCP02786 760 aaKnown RBP6.19□□□□□ -1.42
RBM39-227ENST00000470563 CD19P15391 556 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 CASP2P42575 452 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 FPGSQ05932 587 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 SIM2Q14190 667 aaPredicted RBP6.19□□□□□ -1.42
RBM39-227ENST00000470563 TAF12Q16514 161 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 PTCHD3Q3KNS1 767 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 NRN1LQ496H8 165 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.19□□□□□ -1.42
RBM39-227ENST00000470563 LCNL1Q6ZST4 164 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 LIMS2Q7Z4I7 341 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 RAB11FIP4Q86YS3 637 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 TMTC1Q8IUR5 882 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 CCDC117Q8IWD4 279 aaPredicted RBP6.19□□□□□ -1.42
RBM39-227ENST00000470563 CLASRPQ8N2M8 674 aaKnown RBP6.19□□□□□ -1.42
RBM39-227ENST00000470563 LNX2Q8N448 690 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 PPHLN1Q8NEY8 458 aaKnown RBP6.19□□□□□ -1.42
RBM39-227ENST00000470563 SCAMP5Q8TAC9 235 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 SOCS4Q8WXH5 440 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 OVCA2Q8WZ82 227 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 UNKLQ9H9P5 680 aaKnown RBP6.19□□□□□ -1.42
RBM39-227ENST00000470563 KCNK9Q9NPC2 374 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 NDUFAF4Q9P032 175 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 FEM1BQ9UK73 627 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 RIMKLBQ9ULI2 386 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 FANCD2Q9BXW9 1451 aa6.19□□□□□ -1.42
RBM39-227ENST00000470563 VIRMAQ69YN4 1812 aaKnown RBP6.18□□□□□ -1.42
RBM39-227ENST00000470563 ADCY10Q96PN6 1610 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 POLA1P09884 1462 aaPredicted RBP6.18□□□□□ -1.42
RBM39-227ENST00000470563 TEX14Q8IWB6 1497 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 F5H697 171 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 hCG_1984214I3L0E3 225 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 RGS10O43665 173 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 PRICKLE3O43900 615 aaPredicted RBP6.18□□□□□ -1.42
RBM39-227ENST00000470563 SNX2O60749 519 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 TJP3O95049 919 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 CKMT1AP12532 417 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 BMP7P18075 431 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 GATMP50440 423 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 NXPH1P58417 271 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 ITIH3Q06033 890 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 CSHL1Q14406 222 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 R3HDM1Q15032 1099 aaKnown RBP6.18□□□□□ -1.42
RBM39-227ENST00000470563 TAF5Q15542 800 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 SMAD1Q15797 465 aaKnown RBP6.18□□□□□ -1.42
RBM39-227ENST00000470563 TBRG1Q3YBR2 411 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 MAP3K21Q5TCX8 1036 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 TRABD2AQ86V40 505 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 TTC30AQ86WT1 665 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 LRRC71Q8N4P6 559 aa6.18□□□□□ -1.42
RBM39-227ENST00000470563 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms