RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 SLC9A7Q96T83 725 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 LPIN3Q9BQK8 851 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 TMEM175Q9BSA9 504 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 DESI2Q9BSY9 194 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 SYT11Q9BT88 431 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 COLEC11Q9BWP8 271 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 MIS12Q9H081 205 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 SMG9Q9H0W8 520 aaKnown RBP7.03□□□□□ -1.28
VAMP3-202ENST00000470357 SNX25Q9H3E2 840 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 SEPT11Q9NVA2 429 aaKnown RBP7.03□□□□□ -1.28
VAMP3-202ENST00000470357 ABI2Q9NYB9 513 aaPredicted RBP7.03□□□□□ -1.28
VAMP3-202ENST00000470357 LMCD1Q9NZU5 365 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 NOCTQ9UK39 431 aaKnown RBP7.03□□□□□ -1.28
VAMP3-202ENST00000470357 ZNF318Q5VUA4 2279 aa7.03□□□□□ -1.28
VAMP3-202ENST00000470357 TSC2P49815 1807 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 A0A0A6YYK5 440 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-202ENST00000470357 LCHNA4D1U4 455 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 ANKRD62A6NC57 917 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 MEIS3P2A8K0S8 358 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 DDX3XO00571 662 aaKnown RBP eCLIP7.02□□□□□ -1.292e-6■■□□□ 11.6
VAMP3-202ENST00000470357 CYB561D2O14569 222 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 PJA2O43164 708 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 FZD6O60353 706 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 B3GAT3O94766 335 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 POMCP01189 267 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 ALDH2P05091 517 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 RPLP1P05386 114 aaKnown RBP7.02□□□□□ -1.29
VAMP3-202ENST00000470357 PNMA6AP0CW24 399 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-202ENST00000470357 MYBL1P10243 752 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 IL9P15248 144 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 CD19P15391 556 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 TYMPP19971 482 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 IBSPP21815 317 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-202ENST00000470357 PCSK1P29120 753 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 SOX18P35713 384 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 GNL1P36915 607 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-202ENST00000470357 CLCNKBP51801 687 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 RAD23BP54727 409 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 SLC8A3P57103 927 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 CYP27A1Q02318 531 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 GFPT1Q06210 699 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-202ENST00000470357 SOX4Q06945 474 aaPredicted RBP7.02□□□□□ -1.29
VAMP3-202ENST00000470357 CNGA2Q16280 664 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 LEXMQ3ZCV2 418 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 SGO2Q562F6 1265 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 CLLU1OSQ5K130 101 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 PDE12Q6L8Q7 609 aaKnown RBP7.02□□□□□ -1.29
VAMP3-202ENST00000470357 ZNF438Q7Z4V0 828 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 NOP9Q86U38 636 aaKnown RBP7.02□□□□□ -1.29
VAMP3-202ENST00000470357 REXO1L1PQ8IX06 675 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 RHOT2Q8IXI1 618 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 ADGRF2Q8IZF7 708 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 TMEM35BQ8NCS4 154 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 ACRBPQ8NEB7 543 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 ZNF606Q8WXB4 792 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 TMEM176AQ96HP8 235 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 VCPIP1Q96JH7 1222 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 SENP8Q96LD8 212 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 ALS2CR12Q96Q35 445 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 ISCUQ9H1K1 167 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 SMYD3Q9H7B4 428 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 GOLGA2P5Q9HBQ8 144 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 TBC1D13Q9NVG8 400 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 MIOSQ9NXC5 875 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 TRMT1Q9NXH9 659 aaKnown RBP7.02□□□□□ -1.29
VAMP3-202ENST00000470357 STK39Q9UEW8 545 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 EGFL7Q9UHF1 273 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 PUF60Q9UHX1 559 aaKnown RBP7.02□□□□□ -1.29
VAMP3-202ENST00000470357 LCMT1Q9UIC8 334 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 C5orf42Q9H799 3197 aa7.02□□□□□ -1.29
VAMP3-202ENST00000470357 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 CASTOR2A6NHX0 329 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 A8MXQ7 604 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 FAM229AH3BQW9 127 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 M0QZQ0 153 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 SYN3O14994 580 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 DGKIO75912 1065 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 GHRHP01286 108 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 FTLP02792 175 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 CYP11A1P05108 521 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 CALB1P05937 261 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 TMEM253P0C7T8 217 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 SETSIPP0DME0 302 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 FGFR1P11362 822 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 CDH5P33151 784 aaPredicted RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 NSFP46459 744 aaKnown RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 NDST1P52848 882 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 CDH8P55286 799 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 ETF1P62495 437 aaKnown RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 FMO1Q01740 532 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 MAPRE1Q15691 268 aaKnown RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 CLEC16AQ2KHT3 1053 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 SOWAHAQ2M3V2 549 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 DNTTIP2Q5QJE6 756 aaKnown RBP7.01□□□□□ -1.29
VAMP3-202ENST00000470357 LIN9Q5TKA1 542 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 TAF3Q5VWG9 929 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 ACAD10Q6JQN1 1059 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 LCLAT1Q6UWP7 414 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 XKR5Q6UX68 686 aa7.01□□□□□ -1.29
VAMP3-202ENST00000470357 TMCO2Q7Z6W1 182 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms