RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 PATJQ8NI35 1801 aa18.64■□□□□ 0.57
MRPL28-208ENST00000469744 ATP8B3O60423 1300 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 ANAPC1Q9H1A4 1944 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 ARNTLO00327 626 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 TACC1O75410 805 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 ABL1P00519 1130 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 H2AFXP16104 143 aaPredicted RBP18.63■□□□□ 0.57
MRPL28-208ENST00000469744 PON1P27169 355 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 ATICP31939 592 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 CDH8P55286 799 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 C1orf220Q5T0J3 134 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 KLHDC7AQ5VTJ3 777 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 PAPD7Q5XG87 772 aaKnown RBP18.63■□□□□ 0.57
MRPL28-208ENST00000469744 TXNDC8Q6A555 127 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 ZNF852Q6ZMS4 543 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 GPR161Q8N6U8 529 aaKnown RBP18.63■□□□□ 0.57
MRPL28-208ENST00000469744 LRRN4CLQ8ND94 238 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 GOLGA1Q92805 767 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 E2F7Q96AV8 911 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 FUBP3Q96I24 572 aaKnown RBP eCLIP18.63■□□□□ 0.57
MRPL28-208ENST00000469744 CCL26Q9Y258 94 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 PIAS3Q9Y6X2 628 aa18.63■□□□□ 0.57
MRPL28-208ENST00000469744 A8MXQ7 604 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 STAU1O95793 577 aaKnown RBP18.62■□□□□ 0.57
MRPL28-208ENST00000469744 PLEKP08567 350 aaPredicted RBP18.62■□□□□ 0.57
MRPL28-208ENST00000469744 MAGEA1P43355 309 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 MAGEA11P43364 429 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 SOX9P48436 509 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 FCHO2Q0JRZ9 810 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 ASIC2Q16515 512 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 C10orf76Q5T2E6 689 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 FMNL3Q8IVF7 1028 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 CMTM8Q8IZV2 173 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 MYCBPAPQ8TBZ2 947 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 TMC2Q8TDI7 906 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 LACRTQ9GZZ8 138 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 NLRC4Q9NPP4 1024 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 DMDP11532 3685 aa18.62■□□□□ 0.57
MRPL28-208ENST00000469744 CHADO15335 359 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 TRIM49P0CI25 452 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 TRIM49CP0CI26 452 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 PTPN1P18031 435 aaKnown RBP18.61■□□□□ 0.57
MRPL28-208ENST00000469744 GRIK1P39086 918 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 PRKCIP41743 596 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 AP3M2P53677 418 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 MAPRE1Q15691 268 aaKnown RBP18.61■□□□□ 0.57
MRPL28-208ENST00000469744 ZNF667Q5HYK9 610 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 C1orf210Q8IVY1 113 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 RNF10Q8N5U6 811 aaKnown RBP18.61■□□□□ 0.57
MRPL28-208ENST00000469744 TRIM58Q8NG06 486 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 CSGALNACT1Q8TDX6 532 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 MRPS31Q92665 395 aaKnown RBP18.61■□□□□ 0.57
MRPL28-208ENST00000469744 SECISBP2LQ93073 1101 aaKnown RBP18.61■□□□□ 0.57
MRPL28-208ENST00000469744 CRACR2AQ9BSW2 395 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 BCO2Q9BYV7 579 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 SDCBP2Q9H190 292 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 TRPC7Q9HCX4 862 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 TRIM10Q9UDY6 481 aa18.61■□□□□ 0.57
MRPL28-208ENST00000469744 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.61■□□□□ 0.57
MRPL28-208ENST00000469744 V9GYY5 206 aaPredicted RBP18.61■□□□□ 0.57
MRPL28-208ENST00000469744 RIF1Q5UIP0 2472 aaKnown RBP18.6■□□□□ 0.57
MRPL28-208ENST00000469744 RCCD1A6NED2 376 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 CLDN5O00501 218 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 UCHL3P15374 230 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 AVPR1AP37288 418 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 NBL1P41271 181 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 VAMP7P51809 220 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 CACNA2D1P54289 1103 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 TNK2Q07912 1038 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 ZACNQ401N2 412 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 DCAF17Q5H9S7 520 aaPredicted RBP18.6■□□□□ 0.57
MRPL28-208ENST00000469744 SPOPLQ6IQ16 392 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 SV2AQ7L0J3 742 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 B3GALNT2Q8NCR0 500 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 RIN3Q8TB24 985 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 BPIFB1Q8TDL5 484 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 USP13Q92995 863 aaPredicted RBP18.6■□□□□ 0.57
MRPL28-208ENST00000469744 TRMT2BQ96GJ1 504 aaKnown RBP18.6■□□□□ 0.57
MRPL28-208ENST00000469744 ZNF518BQ9C0D4 1074 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 TRPV5Q9NQA5 729 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 TMEM30AQ9NV96 361 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 ARGLU1Q9NWB6 273 aaPredicted RBP18.6■□□□□ 0.57
MRPL28-208ENST00000469744 SPATA6Q9NWH7 488 aaPredicted RBP18.6■□□□□ 0.57
MRPL28-208ENST00000469744 GTSE1Q9NYZ3 720 aa18.6■□□□□ 0.57
MRPL28-208ENST00000469744 UXTQ9UBK9 157 aaPredicted RBP18.6■□□□□ 0.57
MRPL28-208ENST00000469744 F8VP50 259 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 P4HA2O15460 535 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 GFRA3O60609 400 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 GFPT2O94808 682 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 PRLRP16471 622 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 SLC9A1P19634 815 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 PIK3CAP42336 1068 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 FMO5P49326 533 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 KPNA1P52294 538 aaPredicted RBP18.59■□□□□ 0.57
MRPL28-208ENST00000469744 USP46P62068 366 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 ORC1Q13415 861 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 FZD5Q13467 585 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 TCERG1LQ5VWI1 586 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 VSTM1Q6UX27 236 aa18.59■□□□□ 0.57
MRPL28-208ENST00000469744 INTS8Q75QN2 995 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms