RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 STARD13Q9Y3M8 1113 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 LOC400499M0QZD8 3231 aa13.64□□□□□ -0.23
TRAPPC12-216ENST00000469400 ZBTB24O43167 697 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 TNNC2P02585 160 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 NDUFV2P19404 249 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 GJB2P29033 226 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 DUOXA2Q1HG44 320 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 ANO4Q32M45 955 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 EGFLAMQ63HQ2 1017 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 NUDT18Q6ZVK8 323 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 NAXDQ8IW45 347 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 BBS7Q8IWZ6 715 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 RGL4Q8IZJ4 473 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 GPD1LQ8N335 351 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 IPO4Q8TEX9 1081 aaKnown RBP13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 ACOX2Q99424 681 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 FGFBP2Q9BYJ0 223 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 ZNF518BQ9C0D4 1074 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 SNX25Q9H3E2 840 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 FAM124BQ9H5Z6 455 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 SPHK2Q9NRA0 654 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 OLFML3Q9NRN5 406 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 STK17AQ9UEE5 414 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 CHORDC1Q9UHD1 332 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 SH3BP1Q9Y3L3 701 aa13.63□□□□□ -0.23
TRAPPC12-216ENST00000469400 GCN1Q92616 2671 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 ASXL3Q9C0F0 2248 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 TACC1O75410 805 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 PTPN1P18031 435 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 ALCAMQ13740 583 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 SF3A1Q15459 793 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 HECTD3Q5T447 861 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 SYCP2LQ5T4T6 812 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 SLCO6A1Q86UG4 719 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 CBWD2Q8IUF1 395 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 CHPFQ8IZ52 775 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 NUP93Q8N1F7 819 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 PDZD8Q8NEN9 1154 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 OR6B3Q8NGW1 331 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 MDM1Q8TC05 714 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 HNRNPLLQ8WVV9 542 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 OVCA2Q8WZ82 227 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 FBXO32Q969P5 355 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 WBP2Q969T9 261 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 DUSP9Q99956 384 aaKnown RBP13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 B3GNT5Q9BYG0 378 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 ELOVL4Q9GZR5 314 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 DPEP3Q9H4B8 488 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 CD93Q9NPY3 652 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 CCDC39Q9UFE4 941 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 SUSD2Q9UGT4 822 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 RAXQ9Y2V3 346 aa13.62□□□□□ -0.23
TRAPPC12-216ENST00000469400 ZNF233A6NK53 670 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 CLDN5O00501 218 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 CBFA2T3O75081 653 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 NDUFS2O75306 463 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 PRPF6O94906 941 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 RTN3O95197 1032 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 IDEP14735 1019 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 GNSP15586 552 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 MAOBP27338 520 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 GRIK2Q13002 908 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 SNX30Q5VWJ9 437 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 RRAGBQ5VZM2 374 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 SDE2Q6IQ49 451 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 TOGARAM2Q6ZUX3 1019 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 SV2BQ7L1I2 683 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 SCAMP5Q8TAC9 235 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 FOXJ1Q92949 421 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 MRGPRX1Q96LB2 322 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 BBC3Q96PG8 261 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 GABRG3Q99928 467 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 SLC6A17Q9H1V8 727 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 CCSER2Q9H7U1 834 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 DNAJC17Q9NVM6 304 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 APOBEC2Q9Y235 224 aaKnown RBP13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 RAD54BQ9Y620 910 aa13.61□□□□□ -0.23
TRAPPC12-216ENST00000469400 CEP192Q8TEP8 1941 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 FRMD3A2A2Y4 597 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 KIAA0391O15091 583 aaKnown RBP13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 FLNBO75369 2602 aaKnown RBP13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 CST3P01034 146 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 FAM163BP0C2L3 166 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 IRF1P10914 325 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 TUBP50607 506 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 SURF1Q15526 300 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 WDR45BQ5MNZ6 344 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 GRAMD4Q6IC98 578 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 TRAPPC11Q7Z392 1133 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 GLRX5Q86SX6 157 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 WDR49Q8IV35 697 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 SPRYD3Q8NCJ5 442 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 B3GALNT2Q8NCR0 500 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 TMX3Q96JJ7 454 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 KCNK16Q96T55 309 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 ZDHHC5Q9C0B5 715 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 PCOLCE2Q9UKZ9 415 aa13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 URB1O60287 2271 aaKnown RBP13.6□□□□□ -0.23
TRAPPC12-216ENST00000469400 SETXQ7Z333 2677 aaKnown RBP13.59□□□□□ -0.23
TRAPPC12-216ENST00000469400 PLXNB3Q9ULL4 1909 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms