RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 PCBP4P57723 403 aaKnown RBP13.5□□□□□ -0.25
HDAC6-217ENST00000469223 SLC7A9P82251 487 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 GAD2Q05329 585 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 NFATC3Q12968 1075 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 BTBD8Q5XKL5 378 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 SDE2Q6IQ49 451 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 CPLX2Q6PUV4 134 aaKnown RBP13.5□□□□□ -0.25
HDAC6-217ENST00000469223 CACUL1Q86Y37 369 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 CADM4Q8NFZ8 388 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 C1orf216Q8TAB5 229 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 ZNF274Q96GC6 653 aaPredicted RBP13.5□□□□□ -0.25
HDAC6-217ENST00000469223 FAM117AQ9C073 453 aa13.5□□□□□ -0.25
HDAC6-217ENST00000469223 USP36Q9P275 1121 aaKnown RBP13.5□□□□□ -0.25
HDAC6-217ENST00000469223 K7ELQ4 463 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-217ENST00000469223 HOXC11O43248 304 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-217ENST00000469223 ACADVLP49748 655 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 NEK4P51957 841 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 MAPK7Q13164 816 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 TOB2Q14106 344 aaPredicted RBP13.49□□□□□ -0.25
HDAC6-217ENST00000469223 PDIA5Q14554 519 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 TMEM132DQ14C87 1099 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 ANKRD1Q15327 319 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 ECM1Q16610 540 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 KIAA1614Q5VZ46 1190 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 FBXL19Q6PCT2 694 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 ZPBP2Q6X784 338 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 KIAA1958Q8N8K9 716 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 IGSF8Q969P0 613 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 BICD1Q96G01 975 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 LARP6Q9BRS8 491 aaKnown RBP13.49□□□□□ -0.25
HDAC6-217ENST00000469223 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.49□□□□□ -0.25
HDAC6-217ENST00000469223 RNF38Q9H0F5 515 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 KCNK4Q9NYG8 393 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 TRPM5Q9NZQ8 1165 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 ANKRD6Q9Y2G4 727 aa13.49□□□□□ -0.25
HDAC6-217ENST00000469223 ICE1Q9Y2F5 2266 aa13.48□□□□□ -0.25
HDAC6-217ENST00000469223 METTL12A8MUP2 240 aa13.48□□□□□ -0.25
HDAC6-217ENST00000469223 FAM189A1O60320 539 aa13.48□□□□□ -0.25
HDAC6-217ENST00000469223 USP46P62068 366 aa13.48□□□□□ -0.25
HDAC6-217ENST00000469223 GRAMD4Q6IC98 578 aa13.48□□□□□ -0.25
HDAC6-217ENST00000469223 ZNF574Q6ZN55 896 aaPredicted RBP13.48□□□□□ -0.25
HDAC6-217ENST00000469223 NUDT18Q6ZVK8 323 aa13.48□□□□□ -0.25
HDAC6-217ENST00000469223 CNDP2Q96KP4 475 aaKnown RBP13.48□□□□□ -0.25
HDAC6-217ENST00000469223 PKMYT1Q99640 499 aa13.48□□□□□ -0.25
HDAC6-217ENST00000469223 RUSC1Q9BVN2 902 aa13.48□□□□□ -0.25
HDAC6-217ENST00000469223 CCSER1Q9C0I3 900 aa13.48□□□□□ -0.25
HDAC6-217ENST00000469223 STARD13Q9Y3M8 1113 aa13.48□□□□□ -0.25
HDAC6-217ENST00000469223 OLFM2O95897 454 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 MAPTP10636 758 aaKnown RBP13.47□□□□□ -0.25
HDAC6-217ENST00000469223 PFKLP17858 780 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 GRIK1P39086 918 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 CCT6AP40227 531 aaKnown RBP13.47□□□□□ -0.25
HDAC6-217ENST00000469223 TPMTP51580 245 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 NFKB2Q00653 900 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 TEAD4Q15561 434 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 ANO4Q32M45 955 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 FUT11Q495W5 492 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 INTS6LQ5JSJ4 861 aaKnown RBP13.47□□□□□ -0.25
HDAC6-217ENST00000469223 HAUS3Q68CZ6 603 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 GATAD2AQ86YP4 633 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 SPATA2LQ8IUW3 424 aaPredicted RBP13.47□□□□□ -0.25
HDAC6-217ENST00000469223 KRI1Q8N9T8 703 aaKnown RBP13.47□□□□□ -0.25
HDAC6-217ENST00000469223 TMEM161BQ8NDZ6 487 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 SCFD1Q8WVM8 642 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 PDRG1Q9NUG6 133 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 DNAJC17Q9NVM6 304 aaKnown RBP13.47□□□□□ -0.25
HDAC6-217ENST00000469223 GTF3C4Q9UKN8 822 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 PCDHB6Q9Y5E3 794 aa13.47□□□□□ -0.25
HDAC6-217ENST00000469223 SFI1A8K8P3 1242 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 WASH3PC4AMC7 463 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 LAD1O00515 517 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 HCRTO43612 131 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 KRT38O76015 456 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 LDOC1O95751 146 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-217ENST00000469223 ABL1P00519 1130 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 MBL2P11226 248 aaPredicted RBP13.46□□□□□ -0.25
HDAC6-217ENST00000469223 GLDCP23378 1020 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 MCM7P33993 719 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 GRIA4P48058 902 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 VAC14Q08AM6 782 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 STARD3Q14849 445 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 SV2CQ496J9 727 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 CFAP221Q4G0U5 840 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 KCNT1Q5JUK3 1230 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 METTL3Q86U44 580 aaKnown RBP13.46□□□□□ -0.25
HDAC6-217ENST00000469223 DDX42Q86XP3 938 aaKnown RBP eCLIP13.46□□□□□ -0.25
HDAC6-217ENST00000469223 PDCL2Q8N4E4 241 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 KCNE4Q8WWG9 221 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 TSPAN18Q96SJ8 248 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 MKRN2Q9H000 416 aaKnown RBP13.46□□□□□ -0.25
HDAC6-217ENST00000469223 BRMS1Q9HCU9 246 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 TM9SF3Q9HD45 589 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 DDX19AQ9NUU7 478 aaKnown RBP13.46□□□□□ -0.25
HDAC6-217ENST00000469223 DDX43Q9NXZ2 648 aaKnown RBP13.46□□□□□ -0.25
HDAC6-217ENST00000469223 TBC1D14Q9P2M4 693 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 KIAA1024Q9UPX6 916 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 PAXBP1Q9Y5B6 917 aa13.46□□□□□ -0.25
HDAC6-217ENST00000469223 ZNF840PA6NDX5 716 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 KPNA7A9QM74 516 aa13.45□□□□□ -0.26
HDAC6-217ENST00000469223 PRRT4C9JH25 899 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms