RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 RGS20O76081 388 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 CCNB1P14635 433 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 KLRC1P26715 233 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 ADSLP30566 484 aaPredicted RBP10.33□□□□□ -0.76
NUP50-214ENST00000469163 RFC1P35251 1148 aaPredicted RBP10.33□□□□□ -0.76
NUP50-214ENST00000469163 EMC2Q15006 297 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 SMU1Q2TAY7 513 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 FAM160B1Q5W0V3 765 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 RFWD3Q6PCD5 774 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 TMEM151BQ8IW70 566 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 ANKRD42Q8N9B4 389 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 GIMAP8Q8ND71 665 aaPredicted RBP10.33□□□□□ -0.76
NUP50-214ENST00000469163 CHST13Q8NET6 341 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 SH3TC2Q8TF17 1288 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 CAPSLQ8WWF8 208 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 ATXN2LQ8WWM7 1075 aaKnown RBP10.33□□□□□ -0.76
NUP50-214ENST00000469163 MED30Q96HR3 178 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 PLGRKTQ9HBL7 147 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 GIN1Q9NXP7 522 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 PGAP2Q9UHJ9 254 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 TRAF3IP3Q9Y228 551 aa10.33□□□□□ -0.76
NUP50-214ENST00000469163 ARHGAP10A1A4S6 786 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 NDC80O14777 642 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 INSRRP14616 1297 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 DSTNP60981 165 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 PFKPQ01813 784 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 CCBE1Q6UXH8 406 aaPredicted RBP10.32□□□□□ -0.76
NUP50-214ENST00000469163 GALNT7Q86SF2 657 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 FAM9CQ8IZT9 166 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 MTMR8Q96EF0 704 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 INPP4AQ96PE3 977 aaPredicted RBP10.32□□□□□ -0.76
NUP50-214ENST00000469163 OSMRQ99650 979 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 MSTO1Q9BUK6 570 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 GRIP2Q9C0E4 1043 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 MRPL42Q9Y6G3 142 aaKnown RBP10.32□□□□□ -0.76
NUP50-214ENST00000469163 CAPN6Q9Y6Q1 641 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 PLIN4Q96Q06 1357 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 MROH7Q68CQ1 1323 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 H0YGN5 161 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 STRNO43815 780 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 AKAP3O75969 853 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 FYB2Q5VWT5 728 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 KIAA2013Q8IYS2 634 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.32□□□□□ -0.76
NUP50-214ENST00000469163 RAB3IL1Q8TBN0 382 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 CD99L2Q8TCZ2 262 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 PPP4R1Q8TF05 950 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 SCFD2Q8WU76 684 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 MCUR1Q96AQ8 359 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 DACT3Q96B18 629 aaPredicted RBP10.32□□□□□ -0.76
NUP50-214ENST00000469163 LRMDAQ9H2I8 198 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 CYP26B1Q9NR63 512 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 NFS1Q9Y697 457 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 CDK5RAP2Q96SN8 1893 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 MYH10P35580 1976 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 A0A0B4J203 849 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 VILLO15195 856 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 KLRC4O43908 158 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 RHOBTB3O94955 611 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 CBX6O95503 412 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 CLPTM1O96005 669 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 NPTX2P47972 431 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 DLG4P78352 724 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 POU5F1Q01860 360 aaKnown RBP10.32□□□□□ -0.76
NUP50-214ENST00000469163 EXOC3L4Q17RC7 722 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 BRDTQ58F21 947 aaPredicted RBP10.32□□□□□ -0.76
NUP50-214ENST00000469163 SPOPLQ6IQ16 392 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 FIP1L1Q6UN15 594 aaKnown RBP10.32□□□□□ -0.76
NUP50-214ENST00000469163 DSTYKQ6XUX3 929 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 GALNT4Q8N4A0 578 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 C7orf31Q8N865 590 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 LSMEM1Q8N8F7 131 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 PAIP1Q9H074 479 aaKnown RBP10.32□□□□□ -0.76
NUP50-214ENST00000469163 MYLK2Q9H1R3 596 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 UBE2TQ9NPD8 197 aaPredicted RBP10.32□□□□□ -0.76
NUP50-214ENST00000469163 MTRF1LQ9UGC7 380 aaKnown RBP10.32□□□□□ -0.76
NUP50-214ENST00000469163 WASF2Q9Y6W5 498 aa10.32□□□□□ -0.76
NUP50-214ENST00000469163 A0A087WZ62 844 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 H3BRB1 525 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 GOLGA8MH3BSY2 632 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 H7C0C1 242 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 K7EPI3 171 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 ARHGAP33O14559 1287 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 B4GALT5O43286 388 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 PARNO95453 639 aaKnown RBP10.31□□□□□ -0.76
NUP50-214ENST00000469163 NR4A1P22736 598 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 CCNCP24863 283 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 SKIV2L2P42285 1042 aaKnown RBP10.31□□□□□ -0.76
NUP50-214ENST00000469163 SLCO1A2P46721 670 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 SLC12A3P55017 1021 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 GBE1Q04446 702 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 ADRM1Q16186 407 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 CATSPER4Q7RTX7 472 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 RIOX2Q8IUF8 465 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 DEPDC4Q8N2C3 294 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 PYROXD1Q8WU10 500 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 FDXACB1Q9BRP7 624 aaPredicted RBP10.31□□□□□ -0.76
NUP50-214ENST00000469163 C8orf4Q9NR00 106 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 KRT82Q9NSB4 513 aa10.31□□□□□ -0.76
NUP50-214ENST00000469163 CACNG4Q9UBN1 327 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms