RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 DEFB118Q96PH6 123 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 HERPUD2Q9BSE4 406 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 B3GNT5Q9BYG0 378 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 OSBPL7Q9BZF2 842 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 NEUROG2Q9H2A3 272 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 DMAP1Q9NPF5 467 aaPredicted RBP9.76□□□□□ -0.85
SMC1A-205ENST00000469129 ZDHHC18Q9NUE0 388 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 TBC1D13Q9NVG8 400 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 GRHL1Q9NZI5 618 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 RCOR3Q9P2K3 495 aaPredicted RBP9.76□□□□□ -0.85
SMC1A-205ENST00000469129 FAM153AQ9UHL3 310 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 R3HDM2Q9Y2K5 976 aaKnown RBP9.76□□□□□ -0.85
SMC1A-205ENST00000469129 SNX24Q9Y343 169 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 PCDHB7Q9Y5E2 793 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 KIAA1671Q9BY89 1806 aa9.76□□□□□ -0.85
SMC1A-205ENST00000469129 KIAA0100Q14667 2235 aaKnown RBP9.76□□□□□ -0.85
SMC1A-205ENST00000469129 CFAP69A5D8W1 941 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 DCDC2CA8MYV0 355 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 H3BQF6 201 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 SYN3O14994 580 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 CST8O60676 142 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 ATP2C2O75185 946 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 ENDOD1O94919 500 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 KRT14P02533 472 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 ZFXP17010 805 aaPredicted RBP9.75□□□□□ -0.85
SMC1A-205ENST00000469129 NOS2P35228 1153 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 GGCXP38435 758 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 BRCC3P46736 316 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 KCNJ1P48048 391 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 AFF1P51825 1210 aaKnown RBP9.75□□□□□ -0.85
SMC1A-205ENST00000469129 TKTL1P51854 596 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 EIF3BP55884 814 aaKnown RBP9.75□□□□□ -0.85
SMC1A-205ENST00000469129 MAP3K7CLP57077 242 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 DAOAP59103 153 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 YWHAZP63104 245 aaKnown RBP9.75□□□□□ -0.85
SMC1A-205ENST00000469129 DHX9Q08211 1270 aaKnown RBP9.75□□□□□ -0.85
SMC1A-205ENST00000469129 ELAVL2Q12926 359 aaKnown RBP9.75□□□□□ -0.85
SMC1A-205ENST00000469129 DPYSL3Q14195 570 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 SLC25A52Q3SY17 297 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 RAB41Q5JT25 222 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 KCNT1Q5JUK3 1230 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 ERMARDQ5T6L9 678 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 TRNP1Q6NT89 227 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 SCYL2Q6P3W7 929 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 FAM171BQ6P995 826 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 PAQR9Q6ZVX9 377 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 COLGALT2Q8IYK4 626 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 DCP1BQ8IZD4 617 aaKnown RBP9.75□□□□□ -0.85
SMC1A-205ENST00000469129 ALLCQ8N6M5 410 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 TSEN2Q8NCE0 465 aaKnown RBP9.75□□□□□ -0.85
SMC1A-205ENST00000469129 SLC35B2Q8TB61 432 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 FBXO25Q8TCJ0 367 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 UBLCP1Q8WVY7 318 aaPredicted RBP9.75□□□□□ -0.85
SMC1A-205ENST00000469129 ACSF2Q96CM8 615 aaPredicted RBP9.75□□□□□ -0.85
SMC1A-205ENST00000469129 SLC2A13Q96QE2 648 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 PEBP4Q96S96 227 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 SH3GL2Q99962 352 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 LPIN3Q9BQK8 851 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 PAAF1Q9BRP4 392 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 C11orf84Q9BUA3 381 aaPredicted RBP9.75□□□□□ -0.85
SMC1A-205ENST00000469129 SNRNP25Q9BV90 132 aaKnown RBP9.75□□□□□ -0.85
SMC1A-205ENST00000469129 RNF208Q9H0X6 261 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 POPDC2Q9HBU9 364 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 PCDH9Q9HC56 1237 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 CSNK1G1Q9HCP0 422 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 TMEM51Q9NW97 253 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 CACNG4Q9UBN1 327 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 ZNF148Q9UQR1 794 aa9.75□□□□□ -0.85
SMC1A-205ENST00000469129 TIMM13Q9Y5L4 95 aaPredicted RBP9.75□□□□□ -0.85
SMC1A-205ENST00000469129 TET1Q8NFU7 2136 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 MYBPHLA2RUH7 354 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 SGK1O00141 431 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 SMAPO00193 183 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 CLDN5O00501 218 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 APOL1O14791 398 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 CAPN9O14815 690 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 PQBP1O60828 265 aaKnown RBP9.74□□□□□ -0.85
SMC1A-205ENST00000469129 NBNO60934 754 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 RNF40O75150 1001 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 GABBR2O75899 941 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 HSD17B3P37058 310 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 ADCY8P40145 1251 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 ARL4AP40617 200 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 OR1G1P47890 313 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 ARSEP51690 589 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 ZNF135P52742 658 aaPredicted RBP9.74□□□□□ -0.85
SMC1A-205ENST00000469129 PMS2P54278 862 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 HDAC4P56524 1084 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 OTUD4Q01804 1114 aaKnown RBP9.74□□□□□ -0.85
SMC1A-205ENST00000469129 ADCY1Q08828 1119 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 LLGL1Q15334 1064 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 TRADDQ15628 312 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 OASLQ15646 514 aaKnown RBP9.74□□□□□ -0.85
SMC1A-205ENST00000469129 DPYSL2Q16555 572 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 NFE2Q16621 373 aaPredicted RBP9.74□□□□□ -0.85
SMC1A-205ENST00000469129 PAN2Q504Q3 1202 aaKnown RBP9.74□□□□□ -0.85
SMC1A-205ENST00000469129 C1orf53Q5VUE5 145 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 ZNF280DQ6N043 979 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 ZDHHC24Q6UX98 284 aa9.74□□□□□ -0.85
SMC1A-205ENST00000469129 CYP4V2Q6ZWL3 525 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms