RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 BYSLQ13895 437 aaKnown RBP12.99□□□□□ -0.33
COL5A1-207ENST00000469093 KNOP1Q1ED39 458 aaKnown RBP12.99□□□□□ -0.33
COL5A1-207ENST00000469093 BMT2Q1RMZ1 405 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 SPDYCQ5MJ68 293 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 ARMCX6Q7L4S7 300 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 SYT12Q8IV01 421 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 BBS7Q8IWZ6 715 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 C12orf56Q8IXR9 622 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 PGBD3Q8N328 593 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 ELMO3Q96BJ8 720 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 SPACA7Q96KW9 195 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 DUSP9Q99956 384 aaKnown RBP12.99□□□□□ -0.33
COL5A1-207ENST00000469093 SDCBP2Q9H190 292 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 BLZF1Q9H2G9 400 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 SLC39A2Q9NP94 309 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 BCCIPQ9P287 314 aaKnown RBP eCLIP12.99□□□□□ -0.33
COL5A1-207ENST00000469093 PILRBQ9UKJ0 227 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 RALYQ9UKM9 306 aaKnown RBP12.99□□□□□ -0.33
COL5A1-207ENST00000469093 SH3BP1Q9Y3L3 701 aa12.99□□□□□ -0.33
COL5A1-207ENST00000469093 HELZP42694 1942 aaKnown RBP12.99□□□□□ -0.33
COL5A1-207ENST00000469093 IGF2RP11717 2491 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 UBE4BO95155 1302 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 PVALEFA0A1B0GWK0 134 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 TRIM24O15164 1050 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 POLR2DO15514 142 aaKnown RBP12.98□□□□□ -0.33
COL5A1-207ENST00000469093 EXOC3O60645 756 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 BEST1O76090 585 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 C4BPAP04003 597 aaKnown RBP12.98□□□□□ -0.33
COL5A1-207ENST00000469093 ITPKAP23677 461 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 SLC5A3P53794 718 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 CLDN10P78369 228 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 ANO4Q32M45 955 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 BTBD8Q5XKL5 378 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 SLC23A3Q6PIS1 610 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 UNQ6494/PRO21346Q6UXR6 183 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 ACOT1Q86TX2 421 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 FAM35AQ86V20 835 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 FUKQ8N0W3 1084 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 ZNF513Q8N8E2 541 aaPredicted RBP12.98□□□□□ -0.33
COL5A1-207ENST00000469093 KDF1Q8NAX2 398 aaPredicted RBP12.98□□□□□ -0.33
COL5A1-207ENST00000469093 DEFB124Q8NES8 71 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 ZMIZ2Q8NF64 920 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 PARD3BQ8TEW8 1205 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 ZNF396Q96N95 335 aaPredicted RBP12.98□□□□□ -0.33
COL5A1-207ENST00000469093 MED10Q9BTT4 135 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 TMEM121BQ9BXQ6 578 aaPredicted RBP12.98□□□□□ -0.33
COL5A1-207ENST00000469093 NUSAP1Q9BXS6 441 aaKnown RBP12.98□□□□□ -0.33
COL5A1-207ENST00000469093 DMAP1Q9NPF5 467 aaPredicted RBP12.98□□□□□ -0.33
COL5A1-207ENST00000469093 SPHK2Q9NRA0 654 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 COMMD8Q9NX08 183 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 GMIPQ9P107 970 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 CGNQ9P2M7 1197 aaKnown RBP12.98□□□□□ -0.33
COL5A1-207ENST00000469093 DEC1Q9P2X7 70 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 FAM208BQ5VWN6 2430 aa12.98□□□□□ -0.33
COL5A1-207ENST00000469093 GREM1O60565 184 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 VNN1O95497 513 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 YEATS4O95619 227 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 TBX18O95935 607 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 ENGP17813 658 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 MAPK8P45983 427 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 AP3M2P53677 418 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 BIRC3Q13489 604 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 NCOA4Q13772 614 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 ZNF667Q5HYK9 610 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 C10orf76Q5T2E6 689 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 LYSMD4Q5XG99 296 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 HTR3DQ70Z44 454 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 MIB1Q86YT6 1006 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 CRYBG2Q8N1P7 616 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 DEFB119Q8N690 84 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 SMARCD1Q96GM5 515 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 TNIP3Q96KP6 325 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 SMOQ99835 787 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 SCNM1Q9BWG6 230 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 ZMIZ1Q9ULJ6 1067 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 STARD13Q9Y3M8 1113 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 FRYQ5TBA9 3013 aa12.97□□□□□ -0.33
COL5A1-207ENST00000469093 ATP8B3O60423 1300 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.96□□□□□ -0.33
COL5A1-207ENST00000469093 A0A1W2PQF6 199 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 LRRIQ3A6PVS8 624 aaPredicted RBP12.96□□□□□ -0.33
COL5A1-207ENST00000469093 AP1G2O75843 785 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 GABRG2P18507 467 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 NTSR1P30989 418 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 WASP42768 502 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 AFMP43652 599 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 CUL4BQ13620 913 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 ZNF699Q32M78 642 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 PREPLQ4J6C6 727 aaPredicted RBP12.96□□□□□ -0.33
COL5A1-207ENST00000469093 PEAR1Q5VY43 1037 aaPredicted RBP12.96□□□□□ -0.33
COL5A1-207ENST00000469093 NUDT18Q6ZVK8 323 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 TERB1Q8NA31 727 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 ACOX2Q99424 681 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 KLF16Q9BXK1 252 aaPredicted RBP12.96□□□□□ -0.33
COL5A1-207ENST00000469093 ADAM33Q9BZ11 813 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 NACA2Q9H009 215 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 MAGEF1Q9HAY2 307 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 CSNK1G1Q9HCP0 422 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 CD248Q9HCU0 757 aa12.96□□□□□ -0.33
COL5A1-207ENST00000469093 FSCN3Q9NQT6 498 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms