RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 SLC9A3R1O14745 358 aaPredicted RBP15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 COCHO43405 550 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 THAP12O43422 761 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 TLR5O60602 858 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 MBL2P11226 248 aaPredicted RBP15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 RALAP11233 206 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 ATP5C1P36542 298 aaKnown RBP15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 UBXN1Q04323 297 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 RAPGEF1Q13905 1077 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 MTF1Q14872 753 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 DRAP1Q14919 205 aaPredicted RBP15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 IQCB1Q15051 598 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 FILIP1LQ4L180 1135 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 ZNF852Q6ZMS4 543 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 FAM71AQ8IYT1 594 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 SIX6OS1Q8N1H7 587 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 FLCNQ8NFG4 579 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 STK32AQ8WU08 396 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 SECISBP2LQ93073 1101 aaKnown RBP15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 FAM83CQ9BQN1 747 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 ZSWIM1Q9BR11 485 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 DDX23Q9BUQ8 820 aaKnown RBP15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 NAA15Q9BXJ9 866 aaKnown RBP15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 CCSER2Q9H7U1 834 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 TBC1D17Q9HA65 648 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 CNGB3Q9NQW8 809 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 NAGPAQ9UK23 515 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 CPQQ9Y646 472 aa15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 KIF26AQ9ULI4 1882 aaPredicted RBP15.56■□□□□ 0.08
TMEM39A-205ENST00000468676 TICRRQ7Z2Z1 1910 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 A0A1W2PQH9 124 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 KANSL1LA0AUZ9 987 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 LEFTY2O00292 366 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 TULP2O00295 520 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 FBXO21O94952 628 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 PDGFBP01127 241 aaPredicted RBP15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 RARGP13631 454 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 ACADSBP45954 432 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 KPNA1P52294 538 aaPredicted RBP15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 NUBP1P53384 320 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 AMPD2Q01433 879 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 GOLGA8FQ08AF8 430 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 GOLGA8DPQ0D2H9 430 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 ITPRIPL2Q3MIP1 535 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 APTXQ7Z2E3 356 aaKnown RBP15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 OSCP1Q8WVF1 389 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 ATP2A3Q93084 1043 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 ERGIC2Q96RQ1 377 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 OSBPL6Q9BZF3 934 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 HEBP1Q9NRV9 189 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 DUS2Q9NX74 493 aaKnown RBP15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 DNMT3LQ9UJW3 386 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 SIK3Q9Y2K2 1263 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 FHOD1Q9Y613 1164 aa15.55■□□□□ 0.08
TMEM39A-205ENST00000468676 ZNF318Q5VUA4 2279 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 E2F8A0AVK6 867 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 ATP1A3P13637 1013 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 AOC1P19801 751 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 AVPR2P30518 371 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 KRT9P35527 623 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 GPD2P43304 727 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 IFNAR2P48551 515 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 SNX16P57768 344 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 YWHAGP61981 247 aaKnown RBP eCLIP15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 ADIGQ0VDE8 80 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 RUNX3Q13761 415 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 SYCP1Q15431 976 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 C10orf120Q5SQS8 335 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 PMF1Q6P1K2 205 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 TPRG1Q6ZUI0 275 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 SCD5Q86SK9 330 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 RALGPS2Q86X27 583 aaPredicted RBP15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 NEK11Q8NG66 645 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 IRGQQ8WZA9 623 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 ZFYVE19Q96K21 471 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 PCMTD1Q96MG8 357 aaPredicted RBP15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 PRRX2Q99811 253 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 ULBP1Q9BZM6 244 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 KCNH6Q9H252 994 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 GANQ9H2C0 597 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 LHX5Q9H2C1 402 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 NMUR1Q9HB89 426 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 CBX8Q9HC52 389 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 FAM207AQ9NSI2 230 aaPredicted RBP15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 OLA1Q9NTK5 396 aaKnown RBP15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 SMPD4Q9NXE4 827 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 TBC1D14Q9P2M4 693 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 AJAP1Q9UKB5 411 aaPredicted RBP15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 PCDHGC3Q9UN70 934 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 SIT1Q9Y3P8 196 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 PIAS3Q9Y6X2 628 aa15.54■□□□□ 0.08
TMEM39A-205ENST00000468676 F8VZ95 297 aa15.53■□□□□ 0.08
TMEM39A-205ENST00000468676 GOLGA6L19H0YKK7 550 aa15.53■□□□□ 0.08
TMEM39A-205ENST00000468676 NCAM2O15394 837 aa15.53■□□□□ 0.08
TMEM39A-205ENST00000468676 SART1O43290 800 aaKnown RBP15.53■□□□□ 0.08
TMEM39A-205ENST00000468676 CALCAP01258 141 aa15.53■□□□□ 0.08
TMEM39A-205ENST00000468676 CLCN1P35523 988 aa15.53■□□□□ 0.08
TMEM39A-205ENST00000468676 RPL34P49207 117 aaKnown RBP15.53■□□□□ 0.08
TMEM39A-205ENST00000468676 PGFP49763 221 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms