RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 PNPLA8Q9NP80 782 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 ZNF446Q9NWS9 450 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 ABI2Q9NYB9 513 aaPredicted RBP19.83■□□□□ 0.77
SMC4-209ENST00000468653 PCYOX1Q9UHG3 505 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 RASAL2Q9UJF2 1139 aa19.83■□□□□ 0.77
SMC4-209ENST00000468653 FNDC1Q4ZHG4 1894 aaPredicted RBP19.83■□□□□ 0.77
SMC4-209ENST00000468653 ESYT3A0FGR9 886 aa19.83■□□□□ 0.76
SMC4-209ENST00000468653 C3orf70A6NLC5 250 aaPredicted RBP19.83■□□□□ 0.76
SMC4-209ENST00000468653 EFCAB14O75071 495 aa19.83■□□□□ 0.76
SMC4-209ENST00000468653 TFE3P19532 575 aaPredicted RBP19.83■□□□□ 0.76
SMC4-209ENST00000468653 CYP2F1P24903 491 aa19.83■□□□□ 0.76
SMC4-209ENST00000468653 TNFRSF8P28908 595 aa19.83■□□□□ 0.76
SMC4-209ENST00000468653 HDAC4P56524 1084 aa19.83■□□□□ 0.76
SMC4-209ENST00000468653 SNX1Q13596 522 aa19.83■□□□□ 0.76
SMC4-209ENST00000468653 SLC25A52Q3SY17 297 aa19.83■□□□□ 0.76
SMC4-209ENST00000468653 BEND6Q5SZJ8 279 aaPredicted RBP19.83■□□□□ 0.76
SMC4-209ENST00000468653 SPOUT1Q5T280 376 aaKnown RBP19.83■□□□□ 0.76
SMC4-209ENST00000468653 CENPIQ92674 756 aaPredicted RBP19.83■□□□□ 0.76
SMC4-209ENST00000468653 TBCBQ99426 244 aa19.83■□□□□ 0.76
SMC4-209ENST00000468653 C11orf84Q9BUA3 381 aaPredicted RBP19.83■□□□□ 0.76
SMC4-209ENST00000468653 DCLK3Q9C098 648 aa19.83■□□□□ 0.76
SMC4-209ENST00000468653 RAB17Q9H0T7 212 aa19.83■□□□□ 0.76
SMC4-209ENST00000468653 H7C4K7 107 aa19.82■□□□□ 0.76
SMC4-209ENST00000468653 CAPN9O14815 690 aa19.82■□□□□ 0.76
SMC4-209ENST00000468653 NOS2P35228 1153 aa19.82■□□□□ 0.76
SMC4-209ENST00000468653 SULT1E1P49888 294 aa19.82■□□□□ 0.76
SMC4-209ENST00000468653 FAM117BQ6P1L5 589 aa19.82■□□□□ 0.76
SMC4-209ENST00000468653 TMEM173Q86WV6 379 aaPredicted RBP19.82■□□□□ 0.76
SMC4-209ENST00000468653 SCN4BQ8IWT1 228 aa19.82■□□□□ 0.76
SMC4-209ENST00000468653 GSPT2Q8IYD1 628 aaKnown RBP19.82■□□□□ 0.76
SMC4-209ENST00000468653 CASKIN2Q8WXE0 1202 aa19.82■□□□□ 0.76
SMC4-209ENST00000468653 ATG4AQ8WYN0 398 aa19.82■□□□□ 0.76
SMC4-209ENST00000468653 SLC2A13Q96QE2 648 aa19.82■□□□□ 0.76
SMC4-209ENST00000468653 CHST7Q9NS84 486 aa19.82■□□□□ 0.76
SMC4-209ENST00000468653 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.82■□□□□ 0.76
SMC4-209ENST00000468653 STAP1Q9ULZ2 295 aa19.82■□□□□ 0.76
SMC4-209ENST00000468653 R3HDM2Q9Y2K5 976 aaKnown RBP19.82■□□□□ 0.76
SMC4-209ENST00000468653 YJEFN3A6XGL0 299 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 E7ENQ6 273 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 MYBL2P10244 700 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 ACRP10323 421 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 KCNJ1P48048 391 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 CDH6P55285 790 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 HFE2Q6ZVN8 426 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 CYP4V2Q6ZWL3 525 aaPredicted RBP19.81■□□□□ 0.76
SMC4-209ENST00000468653 STRADAQ7RTN6 431 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 JAMLQ86YT9 394 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 BCL7CQ8WUZ0 217 aaPredicted RBP19.81■□□□□ 0.76
SMC4-209ENST00000468653 TEKT4Q8WW24 435 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 FUBP3Q96I24 572 aaKnown RBP eCLIP19.81■□□□□ 0.76
SMC4-209ENST00000468653 TRIM51Q9BSJ1 452 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 TTPALQ9BTX7 342 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 CALN1Q9BXU9 219 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 CWH43Q9H720 699 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 EFR3BQ9Y2G0 817 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 PCDHB5Q9Y5E4 795 aa19.81■□□□□ 0.76
SMC4-209ENST00000468653 LTFP02788 710 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 PTGIRP43119 386 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 CARSP49589 748 aaKnown RBP19.8■□□□□ 0.76
SMC4-209ENST00000468653 ARPP19P56211 112 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 DEFB103AP81534 67 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 KRT81Q14533 505 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 CCNG2Q16589 344 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 ANKS3Q6ZW76 656 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 MAP7D3Q8IWC1 876 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 IRGQQ8WZA9 623 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 ECEL1O95672 775 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 CD48P09326 243 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 CPB1P15086 417 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 WDR5P61964 334 aaKnown RBP19.8■□□□□ 0.76
SMC4-209ENST00000468653 ADCY2Q08462 1091 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 CUL1Q13616 776 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 PDK2Q15119 407 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 RTP2Q5QGT7 225 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 PM20D1Q6GTS8 502 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 TAS1R1Q7RTX1 841 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 TMCO2Q7Z6W1 182 aaPredicted RBP19.8■□□□□ 0.76
SMC4-209ENST00000468653 RFX6Q8HWS3 928 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 SNRNP25Q9BV90 132 aaKnown RBP19.8■□□□□ 0.76
SMC4-209ENST00000468653 MAK16Q9BXY0 300 aaKnown RBP19.8■□□□□ 0.76
SMC4-209ENST00000468653 GPATCH2LQ9NWQ4 482 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 FEZ2Q9UHY8 353 aaPredicted RBP19.8■□□□□ 0.76
SMC4-209ENST00000468653 NFU1Q9UMS0 254 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 NAALADL1Q9UQQ1 740 aa19.8■□□□□ 0.76
SMC4-209ENST00000468653 VWA8A3KMH1 1905 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 EN2P19622 333 aaPredicted RBP19.79■□□□□ 0.76
SMC4-209ENST00000468653 ATXN1P54253 815 aaKnown RBP19.79■□□□□ 0.76
SMC4-209ENST00000468653 HLTFQ14527 1009 aaKnown RBP eCLIP19.79■□□□□ 0.765e-35■■■■■ 127.1
SMC4-209ENST00000468653 TRADDQ15628 312 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 TAZQ16635 292 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 KCTD19Q17RG1 926 aaPredicted RBP19.79■□□□□ 0.76
SMC4-209ENST00000468653 ERMARDQ5T6L9 678 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 SYPL2Q5VXT5 272 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 VSTM1Q6UX27 236 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 SCML4Q8N228 414 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 GRK7Q8WTQ7 553 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 ZNF689Q96CS4 500 aaPredicted RBP19.79■□□□□ 0.76
SMC4-209ENST00000468653 CCDC114Q96M63 670 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 PGLYRP2Q96PD5 576 aa19.79■□□□□ 0.76
SMC4-209ENST00000468653 NPY6RQ99463 290 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms