RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 SDHAF4Q5VUM1 108 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 LRRTM3Q86VH5 581 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 HAS1Q92839 578 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 EXTL1Q92935 676 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 PTPRHQ9HD43 1115 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 SH3GLB2Q9NR46 395 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 TBC1D14Q9P2M4 693 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 DSEQ9UL01 958 aa12.53□□□□□ -0.4
VPS26A-204ENST00000467852 UBQLN1Q9UMX0 589 aaKnown RBP12.53□□□□□ -0.4
VPS26A-204ENST00000467852 ARID1BQ8NFD5 2236 aaPredicted RBP12.53□□□□□ -0.4
VPS26A-204ENST00000467852 A0A087WWV3 80 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 GFRA2O00451 464 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 XPOTO43592 962 aaKnown RBP12.52□□□□□ -0.41
VPS26A-204ENST00000467852 USP12O75317 370 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 CYP11A1P05108 521 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 FAM87AP0C7U9 286 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 ACADMP11310 421 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 GCFC2P16383 781 aaKnown RBP12.52□□□□□ -0.41
VPS26A-204ENST00000467852 TNFRSF8P28908 595 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 LILRA4P59901 499 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 ASIC1P78348 528 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 ST3GAL1Q11201 340 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 LY6G5CQ5SRR4 150 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 B4GALNT3Q6L9W6 998 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 USP53Q70EK8 1073 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 ETFBKMTQ8IXQ9 262 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 SLFN12Q8IYM2 578 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 TMEM130Q8N3G9 435 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 SCFD1Q8WVM8 642 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 CCNL2Q96S94 520 aaPredicted RBP12.52□□□□□ -0.41
VPS26A-204ENST00000467852 KIFC3Q9BVG8 833 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 SLC25A18Q9H1K4 315 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 ASCL3Q9NQ33 180 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 SLCO1B1Q9Y6L6 691 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 TCHHQ07283 1943 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 NUMA1Q14980 2115 aa12.52□□□□□ -0.41
VPS26A-204ENST00000467852 SCAMP3O14828 347 aaKnown RBP12.51□□□□□ -0.41
VPS26A-204ENST00000467852 HARSP12081 509 aaKnown RBP12.51□□□□□ -0.41
VPS26A-204ENST00000467852 RBMS1P29558 406 aaKnown RBP12.51□□□□□ -0.41
VPS26A-204ENST00000467852 NCAPHQ15003 741 aa12.51□□□□□ -0.41
VPS26A-204ENST00000467852 DDR2Q16832 855 aa12.51□□□□□ -0.41
VPS26A-204ENST00000467852 ARSIQ5FYB1 569 aa12.51□□□□□ -0.41
VPS26A-204ENST00000467852 KCNT1Q5JUK3 1230 aa12.51□□□□□ -0.41
VPS26A-204ENST00000467852 LAYNQ6UX15 382 aa12.51□□□□□ -0.41
VPS26A-204ENST00000467852 BLIDQ8IZY5 108 aa12.51□□□□□ -0.41
VPS26A-204ENST00000467852 NSUN7Q8NE18 718 aaKnown RBP12.51□□□□□ -0.41
VPS26A-204ENST00000467852 SPATA20Q8TB22 786 aa12.51□□□□□ -0.41
VPS26A-204ENST00000467852 SAP25Q8TEE9 199 aa12.51□□□□□ -0.41
VPS26A-204ENST00000467852 SIPA1Q96FS4 1042 aa12.51□□□□□ -0.41
VPS26A-204ENST00000467852 ELF4Q99607 663 aaPredicted RBP12.51□□□□□ -0.41
VPS26A-204ENST00000467852 MRPL4Q9BYD3 311 aaKnown RBP12.51□□□□□ -0.41
VPS26A-204ENST00000467852 KRTAP3-3Q9BYR6 98 aa12.51□□□□□ -0.41
VPS26A-204ENST00000467852 KRTAP3-2Q9BYR7 98 aa12.51□□□□□ -0.41
VPS26A-204ENST00000467852 EPN3Q9H201 632 aa12.51□□□□□ -0.41
VPS26A-204ENST00000467852 ZNF768Q9H5H4 540 aaKnown RBP12.51□□□□□ -0.41
VPS26A-204ENST00000467852 CELSR2Q9HCU4 2923 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 YKT6O15498 198 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 GRIK1P39086 918 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 SLC7A9P82251 487 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 SPAG1Q07617 926 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 SAFBQ15424 915 aaKnown RBP eCLIP12.5□□□□□ -0.41
VPS26A-204ENST00000467852 NFE2Q16621 373 aaPredicted RBP12.5□□□□□ -0.41
VPS26A-204ENST00000467852 ANO4Q32M45 955 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 FUT11Q495W5 492 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 GRAMD4Q6IC98 578 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 MPZL3Q6UWV2 235 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 CHD1LQ86WJ1 897 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 PRCCQ92733 491 aaPredicted RBP12.5□□□□□ -0.41
VPS26A-204ENST00000467852 SKA1Q96BD8 255 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 OTUB2Q96DC9 234 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 DEPDC7Q96QD5 511 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 ACE2Q9BYF1 805 aaPredicted RBP12.5□□□□□ -0.41
VPS26A-204ENST00000467852 PLEKHA5Q9HAU0 1116 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 PHLPP2Q6ZVD8 1323 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 CRYBG3Q68DQ2 2970 aa12.5□□□□□ -0.41
VPS26A-204ENST00000467852 SLC27A2O14975 620 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 SGSM2O43147 1006 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 HOXC11O43248 304 aaPredicted RBP12.49□□□□□ -0.41
VPS26A-204ENST00000467852 CCNT1O60563 726 aaKnown RBP12.49□□□□□ -0.41
VPS26A-204ENST00000467852 GJB6O95452 261 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 IGLV3-19P01714 112 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 ACP1P24666 158 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 CHMLP26374 656 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 TSPY1Q01534 308 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 GRIN1Q05586 938 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 HDAC1Q13547 482 aaPredicted RBP12.49□□□□□ -0.41
VPS26A-204ENST00000467852 PRAMEF14Q5SWL7 426 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 NEK8Q86SG6 692 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 DDX42Q86XP3 938 aaKnown RBP eCLIP12.49□□□□□ -0.41
VPS26A-204ENST00000467852 TMPRSS6Q8IU80 811 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 SGF29Q96ES7 293 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 NAP1L4Q99733 375 aaKnown RBP12.49□□□□□ -0.41
VPS26A-204ENST00000467852 TARS2Q9BW92 718 aaKnown RBP12.49□□□□□ -0.41
VPS26A-204ENST00000467852 SLC26A6Q9BXS9 759 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 RNF26Q9BY78 433 aaPredicted RBP12.49□□□□□ -0.41
VPS26A-204ENST00000467852 MKRN2Q9H000 416 aaKnown RBP12.49□□□□□ -0.41
VPS26A-204ENST00000467852 C6orf106Q9H6K1 298 aaPredicted RBP12.49□□□□□ -0.41
VPS26A-204ENST00000467852 TMPRSS4Q9NRS4 437 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 SMPD4Q9NXE4 827 aa12.49□□□□□ -0.41
VPS26A-204ENST00000467852 TRPM5Q9NZQ8 1165 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms