RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 SH3BP1Q9Y3L3 701 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 FRYQ5TBA9 3013 aa18.3■□□□□ 0.52
TRIM56-203ENST00000467847 GON4LQ3T8J9 2241 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 A0A0A0MRY4 1105 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 VNN1O95497 513 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 C4BPAP04003 597 aaKnown RBP18.29■□□□□ 0.52
TRIM56-203ENST00000467847 HSP90AA1P07900 732 aaKnown RBP18.29■□□□□ 0.52
TRIM56-203ENST00000467847 CHRM1P11229 460 aaPredicted RBP18.29■□□□□ 0.52
TRIM56-203ENST00000467847 PDIA4P13667 645 aaKnown RBP18.29■□□□□ 0.52
TRIM56-203ENST00000467847 P4HA1P13674 534 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 TNFRSF4P43489 277 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 KIR2DL1P43626 348 aaPredicted RBP18.29■□□□□ 0.52
TRIM56-203ENST00000467847 GAD2Q05329 585 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 ACAP1Q15027 740 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 DAB2IPQ5VWQ8 1189 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 BTBD8Q5XKL5 378 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 FUKQ8N0W3 1084 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 OLIG1Q8TAK6 271 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 RLN3Q8WXF3 142 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 SPACA7Q96KW9 195 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 ZDHHC4Q9NPG8 344 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 EXOC1Q9NV70 894 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 COMMD8Q9NX08 183 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 IL37Q9NZH6 218 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 SERTAD1Q9UHV2 236 aa18.29■□□□□ 0.52
TRIM56-203ENST00000467847 PLXND1Q9Y4D7 1925 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 TBC1D3BA6NDS4 549 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 MAP3K13O43283 966 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 SLFN14P0C7P3 912 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 IRF1P10914 325 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 CCDC130P13994 396 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 DLG4P78352 724 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 STK4Q13043 487 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 ORC1Q13415 861 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 ATL3Q6DD88 541 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 BBS7Q8IWZ6 715 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 PHTF2Q8N3S3 785 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 NAT16Q8N8M0 369 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 KIAA0895Q8NCT3 520 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 HMGB4Q8WW32 186 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 PIGKQ92643 395 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 SNX21Q969T3 373 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 TMEM9BQ9NQ34 198 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 DMAC2Q9NW81 257 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 CFAP45Q9UL16 551 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 TNRC6BQ9UPQ9 1833 aaKnown RBP18.28■□□□□ 0.52
TRIM56-203ENST00000467847 PI4KAP42356 2102 aa18.28■□□□□ 0.52
TRIM56-203ENST00000467847 TCRBV21S2A2A0A5A6 115 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 FAM92AA1XBS5 289 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 PATE3B3GLJ2 98 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 HOXC11O43248 304 aaPredicted RBP18.27■□□□□ 0.52
TRIM56-203ENST00000467847 KLRC4O43908 158 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 ADAM23O75077 832 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 ZDHHC11BP0C7U3 371 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 P2RY2P41231 377 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 NOVA1P51513 510 aaKnown RBP18.27■□□□□ 0.52
TRIM56-203ENST00000467847 NDST1P52848 882 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 SGSM1Q2NKQ1 1148 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 ANO4Q32M45 955 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 PREPLQ4J6C6 727 aaPredicted RBP18.27■□□□□ 0.52
TRIM56-203ENST00000467847 UNQ6494/PRO21346Q6UXR6 183 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 LPCAT2Q7L5N7 544 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 SLC9A9Q8IVB4 645 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 ETFBKMTQ8IXQ9 262 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 PGBD3Q8N328 593 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 SLC2A14Q8TDB8 520 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 PAGE5Q96GU1 130 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 SMOQ99835 787 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 SPHK2Q9NRA0 654 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 DEC1Q9P2X7 70 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 HMGXB4Q9UGU5 601 aa18.27■□□□□ 0.52
TRIM56-203ENST00000467847 ACTN4O43707 911 aaKnown RBP18.26■□□□□ 0.51
TRIM56-203ENST00000467847 TLR5O60602 858 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 TULP3O75386 442 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 BEST1O76090 585 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 NR3C1P04150 777 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 RPN1P04843 607 aaKnown RBP18.26■□□□□ 0.51
TRIM56-203ENST00000467847 MAP3K7CLP57077 242 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 ZACNQ401N2 412 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 KMT5BQ4FZB7 885 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 ARMCX6Q7L4S7 300 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 TMEM25Q86YD3 366 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 HSCBQ8IWL3 235 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 ZMIZ2Q8NF64 920 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 TMEM174Q8WUU8 243 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 TAF4BQ92750 862 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 DUSP9Q99956 384 aaKnown RBP18.26■□□□□ 0.51
TRIM56-203ENST00000467847 KCTD10Q9H3F6 313 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 FBXO44Q9H4M3 255 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 FAM49BQ9NUQ9 324 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 ZMIZ1Q9ULJ6 1067 aa18.26■□□□□ 0.51
TRIM56-203ENST00000467847 CEP192Q8TEP8 1941 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 ASCC3Q8N3C0 2202 aaKnown RBP18.25■□□□□ 0.51
TRIM56-203ENST00000467847 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 C1QTNF9BB2RNN3 333 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 GIPC1O14908 333 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 C1QTNF9P0C862 333 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 TRIM21P19474 475 aaKnown RBP18.25■□□□□ 0.51
TRIM56-203ENST00000467847 PIK3CAP42336 1068 aa18.25■□□□□ 0.51
TRIM56-203ENST00000467847 ASPAP45381 313 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms