RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 SORBS1Q9BX66 1292 aaKnown RBP5.86□□□□□ -1.47
GAPVD1-211ENST00000467707 PGAP2Q9UHJ9 254 aa5.86□□□□□ -1.47
GAPVD1-211ENST00000467707 RIMKLBQ9ULI2 386 aa5.86□□□□□ -1.47
GAPVD1-211ENST00000467707 GPR52Q9Y2T5 361 aa5.86□□□□□ -1.47
GAPVD1-211ENST00000467707 MAST3O60307 1309 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 WDR27A2RRH5 827 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 ACTL6BO94805 426 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 IL6RP08887 468 aaPredicted RBP5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 HKR1P10072 659 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 MAKP20794 623 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 CST5P28325 142 aaPredicted RBP5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 DGKQP52824 942 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 AP2B1P63010 937 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 POSTNQ15063 836 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 TRIM60Q495X7 471 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 LIN54Q6MZP7 749 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 CLEC9AQ6UXN8 241 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 RAB11FIP2Q7L804 512 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 SLC44A2Q8IWA5 706 aaPredicted RBP5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 LCORLQ8N3X6 602 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 RP9Q8TA86 221 aaKnown RBP5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 SH3RF3Q8TEJ3 882 aaPredicted RBP5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 OVCA2Q8WZ82 227 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 SLC9A6Q92581 669 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 SDCCAG3Q96C92 435 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 VPS50Q96JG6 964 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 Q96MF0 132 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 TTPALQ9BTX7 342 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 PRDM8Q9NQV8 689 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 ANKFY1Q9P2R3 1169 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 GABRQQ9UN88 632 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 SLC27A6Q9Y2P4 619 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 REXO2Q9Y3B8 237 aaKnown RBP5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 PCDHGB3Q9Y5G1 929 aa5.85□□□□□ -1.47
GAPVD1-211ENST00000467707 PNMA6EA0A0J9YXQ4 647 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 EFCAB8A8MWE9 144 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 J3KTA2 159 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 IPO5O00410 1097 aaKnown RBP5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 EXOC5O00471 708 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 DHHO43323 396 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 ORC4O43929 436 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 USP1O94782 785 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 WDR47O94967 919 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 TJP3O95049 919 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 HTR7P34969 479 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 CDK7P50613 346 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 SUMO2P61956 95 aaKnown RBP5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 EIF2B5Q13144 721 aaKnown RBP5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 EFR3AQ14156 821 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 LSM12Q3MHD2 195 aaKnown RBP5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 ADCK5Q3MIX3 580 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 ALFQ53S48 1182 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 TREML2Q5T2D2 321 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 DENND2CQ68D51 928 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 SULT6B1Q6IMI4 303 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 JMJD6Q6NYC1 403 aaPredicted RBP5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 Q6ZNX1 250 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 USP51Q70EK9 711 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 MAVSQ7Z434 540 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 WDR53Q7Z5U6 358 aaPredicted RBP5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 SPPL3Q8TCT6 385 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 ZSCAN31Q96LW9 406 aaPredicted RBP5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 FAM167BQ9BTA0 163 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 DDX23Q9BUQ8 820 aaKnown RBP5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 DPCDQ9BVM2 203 aaPredicted RBP5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 WDR11Q9BZH6 1224 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 PABPC3Q9H361 631 aaKnown RBP5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 SLC2A4RGQ9NR83 387 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 KIF17Q9P2E2 1029 aa5.84□□□□□ -1.47
GAPVD1-211ENST00000467707 AGPSO00116 658 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 DNPH1O43598 174 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 CBFA2T3O75081 653 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 FAM155BO75949 473 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 FESP07332 822 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 RHOP08100 348 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 PDHA1P08559 390 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 TMEM225BP0DP42 221 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 ZFXP17010 805 aaPredicted RBP5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 NTSR1P30989 418 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 MCM2P49736 904 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 TPTEP56180 551 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 EIF4A1P60842 406 aaKnown RBP5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 SP2Q02086 613 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 LY6KQ17RY6 165 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 RINT1Q6NUQ1 792 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 NFRKBQ6P4R8 1299 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 PRRT2Q7Z6L0 340 aaPredicted RBP5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 CLASRPQ8N2M8 674 aaKnown RBP5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 SUPT20HQ8NEM7 779 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 THAP4Q8WY91 577 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 RUBCNQ92622 972 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 RFKQ969G6 155 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 R3HDM4Q96D70 268 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 TBATAQ96M53 351 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 NAP1L4Q99733 375 aaKnown RBP5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 MLST8Q9BVC4 326 aa5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 SCAF8Q9UPN6 1271 aaKnown RBP5.83□□□□□ -1.48
GAPVD1-211ENST00000467707 TMPRSS11DO60235 418 aa5.82□□□□□ -1.48
GAPVD1-211ENST00000467707 URI1O94763 535 aaPredicted RBP5.82□□□□□ -1.48
GAPVD1-211ENST00000467707 GKP32189 559 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms