RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 TMEM30AQ9NV96 361 aa14.88□□□□□ -0.03
CCHCR1-211ENST00000467553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.88□□□□□ -0.03
CCHCR1-211ENST00000467553 HELZP42694 1942 aaKnown RBP14.88□□□□□ -0.03
CCHCR1-211ENST00000467553 OTOL1A6NHN0 477 aaPredicted RBP14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 SLC30A4O14863 429 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 MAP3K7CLP57077 242 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 EML3Q32P44 896 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 HEATR6Q6AI08 1181 aaKnown RBP14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 PRR23CQ6ZRP0 262 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 SYT13Q7L8C5 426 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 TRIM59Q8IWR1 403 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 TTC39CQ8N584 583 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 FAM160A2Q8N612 972 aaPredicted RBP14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 ARL14EPQ8N8R7 260 aaPredicted RBP14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 TTC16Q8NEE8 873 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 OVCA2Q8WZ82 227 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 SMARCD1Q96GM5 515 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 FAXDC2Q96IV6 333 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 ZC3H10Q96K80 434 aaKnown RBP14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 MED15Q96RN5 788 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 CYP2S1Q96SQ9 504 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 DMAP1Q9NPF5 467 aaPredicted RBP14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 KRT82Q9NSB4 513 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 EBF1Q9UH73 591 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 PCDHGA5Q9Y5G8 931 aa14.87□□□□□ -0.03
CCHCR1-211ENST00000467553 C2orf78A6NCI8 922 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 SLC9A3R1O14745 358 aaPredicted RBP14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 RNF40O75150 1001 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 RPP40O75818 363 aaKnown RBP14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 BEST1O76090 585 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 RTN3O95197 1032 aaPredicted RBP14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 EGFP01133 1207 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 AFPP02771 609 aaKnown RBP14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 FAM200BP0CF97 657 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 ARSAP15289 507 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 YWHAQP27348 245 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 LIMK1P53667 647 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 MARSP56192 900 aaKnown RBP14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 SLC7A9P82251 487 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 TAF10Q12962 218 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 CUL2Q13617 745 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 LPAL2Q16609 132 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 DPCR1Q3MIW9 517 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 C11orf74Q86VG3 221 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 DDX42Q86XP3 938 aaKnown RBP eCLIP14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 EHBP1Q8NDI1 1231 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 SCAMP5Q8TAC9 235 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 SH3RF2Q8TEC5 729 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 JAKMIP2Q96AA8 810 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 CHFRQ96EP1 664 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 TMEM176AQ96HP8 235 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 CNOT6LQ96LI5 555 aaKnown RBP14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 NT5C1BQ96P26 610 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 SLITRK1Q96PX8 696 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 HNRNPABQ99729 332 aaKnown RBP14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 SMOQ99835 787 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 COMMD8Q9NX08 183 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 CHORDC1Q9UHD1 332 aaPredicted RBP14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 DACH1Q9UI36 760 aa14.86□□□□□ -0.03
CCHCR1-211ENST00000467553 NCOR2Q9Y618 2525 aa14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 ZNF840PA6NDX5 716 aa14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 PMM2O15305 246 aa14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 P4HA2O15460 535 aa14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 MTIF2P46199 727 aaKnown RBP14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 RAD23BP54727 409 aa14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 YWHAEP62258 255 aaKnown RBP14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 PPP1R26Q5T8A7 1209 aaPredicted RBP14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 PPM1KQ8N3J5 372 aa14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 SLC4A11Q8NBS3 891 aa14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 PDZD8Q8NEN9 1154 aa14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 ZMIZ2Q8NF64 920 aa14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 RIN3Q8TB24 985 aa14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 FBXO32Q969P5 355 aa14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 SLC22A12Q96S37 553 aa14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 C2orf42Q9NWW7 574 aa14.85□□□□□ -0.03
CCHCR1-211ENST00000467553 LEFTY2O00292 366 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 TNFRSF10BO14763 440 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 AXIN1O15169 862 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 RHOBTB1O94844 696 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 EPN2O95208 641 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 APBB3O95704 486 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 OLFM2O95897 454 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 ZNF806P0C7X5 589 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 TBXAS1P24557 533 aaPredicted RBP14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 ERCC5P28715 1186 aaPredicted RBP14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 EIF2DP41214 584 aaKnown RBP14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 SLC5A3P53794 718 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 HSF5Q4G112 596 aaPredicted RBP14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 HSP90AA4PQ58FG1 418 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 RRAGAQ7L523 313 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 IRF2BP1Q8IU81 584 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 LMO3Q8TAP4 145 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 FBRSL1Q9HCM7 1045 aaKnown RBP14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 CSNK1G1Q9HCP0 422 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 PCDHB4Q9Y5E5 795 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 WNT6Q9Y6F9 365 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 ATG2BQ96BY7 2078 aa14.84□□□□□ -0.03
CCHCR1-211ENST00000467553 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.83□□□□□ -0.04
CCHCR1-211ENST00000467553 MBD3O95983 291 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms