RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 CCP110O43303 1012 aa5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 IL18RAPO95256 599 aa5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 A1BGP04217 495 aa5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 CHRM5P08912 532 aaPredicted RBP5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 DLDP09622 509 aaKnown RBP5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 BTF3P20290 206 aaKnown RBP5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 LRPAP1P30533 357 aa5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 UBE4AQ14139 1066 aa5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 XAGE5Q8WWM1 108 aa5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 SPSB4Q96A44 273 aa5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 LENG8Q96PV6 779 aaPredicted RBP5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 SNX18Q96RF0 628 aa5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 DKK4Q9UBT3 224 aa5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 CORO2BQ9UQ03 480 aa5.38□□□□□ -1.55
PRPF40A-205ENST00000467114 FER1L4A9Z1Z3 1794 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 CLCA1A8K7I4 914 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 RASA4BC9J798 803 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 hCG_1984214I3L0E3 225 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 KPNA5O15131 536 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 RASA4O43374 803 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 PDE6CP51160 858 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 FHL1Q13642 323 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 PLA1AQ53H76 456 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 PXDC1Q5TGL8 231 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 MIS18BP1Q6P0N0 1132 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 ZNF517Q6ZMY9 492 aaPredicted RBP5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 CNGA4Q8IV77 575 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 TERB1Q8NA31 727 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 SNX22Q96L94 193 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 AS3MTQ9HBK9 375 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 MYO1AQ9UBC5 1043 aa5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 MRPS17Q9Y2R5 130 aaKnown RBP5.37□□□□□ -1.55
PRPF40A-205ENST00000467114 KCNQ3O43525 872 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 USP1O94782 785 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 PRKCBP05771 671 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 CYP2A6P11509 494 aaPredicted RBP5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 SERPINB3P29508 390 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 HTR3AP46098 478 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 RABEP1Q15276 862 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 CERKLQ49MI3 558 aaPredicted RBP5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 UNC13DQ70J99 1090 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 DPP9Q86TI2 863 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 CCAR1Q8IX12 1150 aaKnown RBP5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 ATP11CQ8NB49 1132 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 PIGOQ8TEQ8 1089 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 RAPGEF4Q8WZA2 1011 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 GJA10Q969M2 543 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 SGCZQ96LD1 299 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 TRIM5Q9C035 493 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 MID2Q9UJV3 735 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 CCNL1Q9UK58 526 aaPredicted RBP5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 CDY1Q9Y6F8 540 aa5.36□□□□□ -1.55
PRPF40A-205ENST00000467114 AREL1O15033 823 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 NCK2O43639 380 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 EXOC3O60645 756 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 PDE8BO95263 885 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 ANXA2P07355 339 aaKnown RBP5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 ZKSCAN1P17029 563 aaPredicted RBP5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 PLCD1P51178 756 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 AK2P54819 239 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 SATB1Q01826 763 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 FHL3Q13643 280 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 ZNF750Q32MQ0 723 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 PTCHD3Q3KNS1 767 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 Q4G0T1 1027 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 SYCP2LQ5T4T6 812 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 KCTD20Q7Z5Y7 419 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 SLC15A3Q8IY34 581 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 OR2C3Q8N628 320 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 PRSS3P2Q8NHM4 247 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 BPIFB1Q8TDL5 484 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 PARD3BQ8TEW8 1205 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 OSCP1Q8WVF1 389 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 BRI3BPQ8WY22 251 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 SELENOOQ9BVL4 669 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 STARD7Q9NQZ5 370 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 AFG3L2Q9Y4W6 797 aa5.35□□□□□ -1.55
PRPF40A-205ENST00000467114 LOC102723971A0A1B0GUV8 181 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 TCRBV5S1A1TA0A578 114 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 POM121BA6NF01 834 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 UBE2Q2LH0YL09 131 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 MYO1CO00159 1063 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 RRP9O43818 475 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 FGF18O76093 207 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 MYL3P08590 195 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 PARP1P09874 1014 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 FGFR2P21802 821 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 ATP5F1P24539 256 aaPredicted RBP5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 ACVR2AP27037 513 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 STT3AP46977 705 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 CARSP49589 748 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 RENBPP51606 427 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 POLGP54098 1239 aaPredicted RBP5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 IFIT5Q13325 482 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 PICALMQ13492 652 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 CYP1B1Q16678 543 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 MGAT5BQ3V5L5 792 aa5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 RNASE12Q5GAN4 147 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 L1TD1Q5T7N2 865 aaKnown RBP5.34□□□□□ -1.55
PRPF40A-205ENST00000467114 DEPDC1Q5TB30 811 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms