RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 LMBRD1Q9NUN5 540 aa4.69□□□□□ -1.66
XRN1-206ENST00000467077 SERPINB13Q9UIV8 391 aa4.69□□□□□ -1.66
XRN1-206ENST00000467077 PDS5BQ9NTI5 1447 aa4.69□□□□□ -1.66
XRN1-206ENST00000467077 SBNO2Q9Y2G9 1366 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 A0A087WYN8 130 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 INPPL1O15357 1258 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 DTNBO60941 627 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 CGAP01215 116 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 CYP2C9P11712 490 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 TBXAS1P24557 533 aaPredicted RBP4.68□□□□□ -1.66
XRN1-206ENST00000467077 KEAP1Q14145 624 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 MGAT5BQ3V5L5 792 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 LINC01465Q8N7H1 131 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 FAM167AQ96KS9 214 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 TEKT5Q96M29 485 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 TUBB6Q9BUF5 446 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 SCNM1Q9BWG6 230 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 RBM38Q9H0Z9 239 aaKnown RBP4.68□□□□□ -1.66
XRN1-206ENST00000467077 TMEM45AQ9NWC5 275 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 XPR1Q9UBH6 696 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 LPAR3Q9UBY5 353 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 ATP8A1Q9Y2Q0 1164 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 PCDHA1Q9Y5I3 950 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 RIMBP3CA6NJZ7 1639 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 RIMBP3BA6NNM3 1639 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 RIMBP3Q9UFD9 1639 aa4.68□□□□□ -1.66
XRN1-206ENST00000467077 NDUFB8O95169 186 aa4.67□□□□□ -1.66
XRN1-206ENST00000467077 PLGP00747 810 aaPredicted RBP4.67□□□□□ -1.66
XRN1-206ENST00000467077 FTLP02792 175 aaPredicted RBP4.67□□□□□ -1.66
XRN1-206ENST00000467077 FGF2P09038 288 aa4.67□□□□□ -1.66
XRN1-206ENST00000467077 XRCC6P12956 609 aaKnown RBP eCLIP4.67□□□□□ -1.66
XRN1-206ENST00000467077 DIO1P49895 249 aa4.67□□□□□ -1.66
XRN1-206ENST00000467077 HK3P52790 923 aa4.67□□□□□ -1.66
XRN1-206ENST00000467077 NPNTQ6UXI9 565 aa4.67□□□□□ -1.66
XRN1-206ENST00000467077 NECAB2Q7Z6G3 386 aa4.67□□□□□ -1.66
XRN1-206ENST00000467077 C17orf80Q9BSJ5 609 aa4.67□□□□□ -1.66
XRN1-206ENST00000467077 PUS7LQ9H0K6 701 aaKnown RBP4.67□□□□□ -1.66
XRN1-206ENST00000467077 CD93Q9NPY3 652 aa4.67□□□□□ -1.66
XRN1-206ENST00000467077 SLC5A4Q9NY91 659 aa4.67□□□□□ -1.66
XRN1-206ENST00000467077 MRC2Q9UBG0 1479 aa4.67□□□□□ -1.66
XRN1-206ENST00000467077 WDR62O43379 1518 aa4.67□□□□□ -1.66
XRN1-206ENST00000467077 PEG3Q9GZU2 1588 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 MYO1CO00159 1063 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 TMPRSS11DO60235 418 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 TYRP14679 529 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 RHCEP18577 417 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 ARRB2P32121 409 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 MTHFSP49914 203 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 PFKFB3Q16875 520 aaPredicted RBP4.66□□□□□ -1.66
XRN1-206ENST00000467077 EMC10Q5UCC4 262 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 DCAF12L1Q5VU92 463 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 ZNF280BQ86YH2 543 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 CNTD1Q8N815 330 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 TMEM171Q8WVE6 324 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 JPH3Q8WXH2 748 aaPredicted RBP4.66□□□□□ -1.66
XRN1-206ENST00000467077 HIC2Q96JB3 615 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 SF3B5Q9BWJ5 86 aaKnown RBP4.66□□□□□ -1.66
XRN1-206ENST00000467077 COG5Q9UP83 839 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 TMX2Q9Y320 296 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 EVPLQ92817 2033 aa4.66□□□□□ -1.66
XRN1-206ENST00000467077 TMEM272A0A1B0GTI8 110 aa4.65□□□□□ -1.67
XRN1-206ENST00000467077 SPTLC2O15270 562 aa4.65□□□□□ -1.67
XRN1-206ENST00000467077 EPN2O95208 641 aa4.65□□□□□ -1.67
XRN1-206ENST00000467077 DGKEP52429 567 aa4.65□□□□□ -1.67
XRN1-206ENST00000467077 ADKP55263 362 aaKnown RBP4.65□□□□□ -1.67
XRN1-206ENST00000467077 P2RX3P56373 397 aa4.65□□□□□ -1.67
XRN1-206ENST00000467077 SOX8P57073 446 aa4.65□□□□□ -1.67
XRN1-206ENST00000467077 MFSD13AQ14CX5 517 aa4.65□□□□□ -1.67
XRN1-206ENST00000467077 CERCAMQ5T4B2 595 aa4.65□□□□□ -1.67
XRN1-206ENST00000467077 NADSYN1Q6IA69 706 aa4.65□□□□□ -1.67
XRN1-206ENST00000467077 TRAPPC11Q7Z392 1133 aa4.65□□□□□ -1.67
XRN1-206ENST00000467077 COL23A1Q86Y22 540 aaPredicted RBP4.65□□□□□ -1.67
XRN1-206ENST00000467077 IGFBPL1Q8WX77 278 aa4.65□□□□□ -1.67
XRN1-206ENST00000467077 FAXDC2Q96IV6 333 aa4.65□□□□□ -1.67
XRN1-206ENST00000467077 DNMT3BQ9UBC3 853 aaKnown RBP4.65□□□□□ -1.67
XRN1-206ENST00000467077 PCDHA7Q9UN72 937 aa4.65□□□□□ -1.67
XRN1-206ENST00000467077 USP12O75317 370 aa4.64□□□□□ -1.67
XRN1-206ENST00000467077 PAPSS2O95340 614 aaPredicted RBP4.64□□□□□ -1.67
XRN1-206ENST00000467077 CREB1P16220 341 aa4.64□□□□□ -1.67
XRN1-206ENST00000467077 MLH1P40692 756 aa4.64□□□□□ -1.67
XRN1-206ENST00000467077 AMPD3Q01432 767 aa4.64□□□□□ -1.67
XRN1-206ENST00000467077 EGR4Q05215 589 aa4.64□□□□□ -1.67
XRN1-206ENST00000467077 LTBQ06643 244 aa4.64□□□□□ -1.67
XRN1-206ENST00000467077 SLC14A1Q13336 389 aa4.64□□□□□ -1.67
XRN1-206ENST00000467077 FAM110CQ1W6H9 321 aa4.64□□□□□ -1.67
XRN1-206ENST00000467077 INAVAQ3KP66 663 aa4.64□□□□□ -1.67
XRN1-206ENST00000467077 SLC39A5Q6ZMH5 540 aa4.64□□□□□ -1.67
XRN1-206ENST00000467077 CBARPQ8N350 705 aaPredicted RBP4.64□□□□□ -1.67
XRN1-206ENST00000467077 NGDNQ8NEJ9 315 aaKnown RBP4.64□□□□□ -1.67
XRN1-206ENST00000467077 PNPOQ9NVS9 261 aa4.64□□□□□ -1.67
XRN1-206ENST00000467077 GAR1Q9NY12 217 aaKnown RBP4.64□□□□□ -1.67
XRN1-206ENST00000467077 C2CD4BA6NLJ0 364 aa4.63□□□□□ -1.67
XRN1-206ENST00000467077 SOCS5O75159 536 aa4.63□□□□□ -1.67
XRN1-206ENST00000467077 MYBL2P10244 700 aa4.63□□□□□ -1.67
XRN1-206ENST00000467077 HOXB2P14652 356 aa4.63□□□□□ -1.67
XRN1-206ENST00000467077 HDCP19113 662 aa4.63□□□□□ -1.67
XRN1-206ENST00000467077 CDK11BP21127 795 aaKnown RBP4.63□□□□□ -1.67
XRN1-206ENST00000467077 KCNA3P22001 575 aa4.63□□□□□ -1.67
XRN1-206ENST00000467077 CDKN1CP49918 316 aaPredicted RBP4.63□□□□□ -1.67
XRN1-206ENST00000467077 WNT3P56703 355 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms