RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 TLR3O15455 904 aaKnown RBP18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 VCLP18206 1134 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 RPA3P35244 121 aaPredicted RBP18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 ACADVLP49748 655 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 NCOA4Q13772 614 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 PDK3Q15120 406 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 SCARA5Q6ZMJ2 495 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 ENOSF1Q7L5Y1 443 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 TRAIPQ9BWF2 469 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 KANSL3Q9P2N6 904 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 ZNF180Q9UJW8 692 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 DMTF1Q9Y222 760 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 LOXHD1Q8IVV2 1947 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 A0A0G2JND7 137 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 HTR3EA5X5Y0 456 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 FZD9O00144 591 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 PGM3O95394 542 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 WEE2P0C1S8 567 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 ARL2P36404 184 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 NOMO3P69849 1222 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 CLDN10P78369 228 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 CDK16Q00536 496 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 CENPCQ03188 943 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 PDCD4Q53EL6 469 aaKnown RBP18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 EAPPQ56P03 285 aaPredicted RBP18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 AAGABQ6PD74 315 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 ABRAQ8N0Z2 381 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 RFWD2Q8NHY2 731 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 MTMR12Q9C0I1 747 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 GINM1Q9NU53 330 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 THEGQ9P2T0 379 aa18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.78■□□□□ 0.6
SNAPC3-205ENST00000467062 COL11A1P12107 1806 aaPredicted RBP18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 A0A0B4J269 797 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 C19orf81C9J6K1 198 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 E9PBE3 544 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 BOLA2-SMG1P6H3BVE0 249 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 CLPTM1O96005 669 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 PGK2P07205 417 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 ABHD2P08910 425 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 KRT15P19012 456 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 PAX3P23760 479 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 IVDP26440 423 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 OAZ1P54368 228 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 TBL3Q12788 808 aaKnown RBP18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 SPIDRQ14159 915 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 MMEL1Q495T6 779 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 RAPH1Q70E73 1250 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 BBS5Q8N3I7 341 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 ARL10Q8N8L6 244 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 GLIS1Q8NBF1 620 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 SKA1Q96BD8 255 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 DCLK3Q9C098 648 aa18.77■□□□□ 0.6
SNAPC3-205ENST00000467062 CNTNAP2Q9UHC6 1331 aa18.77■□□□□ 0.59
SNAPC3-205ENST00000467062 KANSL1LA0AUZ9 987 aa18.77■□□□□ 0.59
SNAPC3-205ENST00000467062 CSDE1O75534 798 aaKnown RBP18.77■□□□□ 0.59
SNAPC3-205ENST00000467062 COG7P83436 770 aa18.77■□□□□ 0.59
SNAPC3-205ENST00000467062 SLC1A5Q15758 541 aa18.77■□□□□ 0.59
SNAPC3-205ENST00000467062 TXNRD3NBQ6F5E7 133 aa18.77■□□□□ 0.59
SNAPC3-205ENST00000467062 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.77■□□□□ 0.59
SNAPC3-205ENST00000467062 TRAPPC12Q8WVT3 735 aa18.77■□□□□ 0.59
SNAPC3-205ENST00000467062 ZNF606Q8WXB4 792 aa18.77■□□□□ 0.59
SNAPC3-205ENST00000467062 ZFRQ96KR1 1074 aaKnown RBP18.77■□□□□ 0.59
SNAPC3-205ENST00000467062 C12orf42Q96LP6 360 aa18.77■□□□□ 0.59
SNAPC3-205ENST00000467062 KLHL4Q9C0H6 718 aa18.77■□□□□ 0.59
SNAPC3-205ENST00000467062 TUBA8Q9NY65 449 aaPredicted RBP18.77■□□□□ 0.59
SNAPC3-205ENST00000467062 DNAH12Q6ZR08 3092 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 ZNFX1Q9P2E3 1918 aaKnown RBP18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 EXOC1LA0A1B0GW35 172 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 CBFA2T3O75081 653 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 ZC3H11AO75152 810 aaKnown RBP eCLIP18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 PROSCO94903 275 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 MAN1A1P33908 653 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 TCF7P36402 384 aaPredicted RBP18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 NAMPTP43490 491 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 MYL6P60660 151 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 ORC1Q13415 861 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 MAP7D1Q3KQU3 841 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 ANKRD20A4Q4UJ75 823 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 TMEM53Q6P2H8 277 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 TDRPQ86YL5 185 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 RELL1Q8IUW5 271 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 PANX3Q96QZ0 392 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 STYXL1Q9Y6J8 313 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 B2RBV5 119 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 F8VP50 259 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 TM7SF2O76062 418 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 FARP2O94887 1054 aaPredicted RBP18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 ZSCAN5DPP0CG00 497 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 ATF2P15336 505 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 STAT5BP51692 787 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 LVRNQ6Q4G3 990 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 UGT2A3Q6UWM9 527 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 C3orf62Q6ZUJ4 267 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 PATL1Q86TB9 770 aaKnown RBP18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 SLC16A10Q8TF71 515 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 FAM172AQ8WUF8 416 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 HSPBAP1Q96EW2 488 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 C9orf72Q96LT7 481 aa18.76■□□□□ 0.59
SNAPC3-205ENST00000467062 PLVAPQ9BX97 442 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms