RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 NAP1L2Q9ULW6 460 aaPredicted RBP13.55□□□□□ -0.24
UBR4-210ENST00000466969 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.55□□□□□ -0.24
UBR4-210ENST00000466969 DNHD1Q96M86 4753 aa13.54□□□□□ -0.24
UBR4-210ENST00000466969 CCDC196A0A1B0GTZ2 297 aa13.54□□□□□ -0.24
UBR4-210ENST00000466969 HARSP12081 509 aaKnown RBP13.54□□□□□ -0.24
UBR4-210ENST00000466969 ADD1P35611 737 aaKnown RBP13.54□□□□□ -0.24
UBR4-210ENST00000466969 ANO4Q32M45 955 aa13.54□□□□□ -0.24
UBR4-210ENST00000466969 SLC10A6Q3KNW5 377 aa13.54□□□□□ -0.24
UBR4-210ENST00000466969 ZC3H18Q86VM9 953 aaKnown RBP13.54□□□□□ -0.24
UBR4-210ENST00000466969 TMPRSS6Q8IU80 811 aa13.54□□□□□ -0.24
UBR4-210ENST00000466969 IFT74Q96LB3 600 aa13.54□□□□□ -0.24
UBR4-210ENST00000466969 ACO2Q99798 780 aaKnown RBP13.54□□□□□ -0.24
UBR4-210ENST00000466969 C6orf106Q9H6K1 298 aaPredicted RBP13.54□□□□□ -0.24
UBR4-210ENST00000466969 SMPD4Q9NXE4 827 aa13.54□□□□□ -0.24
UBR4-210ENST00000466969 ANAPC2Q9UJX6 822 aa13.54□□□□□ -0.24
UBR4-210ENST00000466969 ATXN7L1Q9ULK2 861 aaPredicted RBP13.54□□□□□ -0.24
UBR4-210ENST00000466969 UBQLN1Q9UMX0 589 aaKnown RBP13.54□□□□□ -0.24
UBR4-210ENST00000466969 RBM8AQ9Y5S9 174 aaKnown RBP13.54□□□□□ -0.24
UBR4-210ENST00000466969 CPQQ9Y646 472 aa13.54□□□□□ -0.24
UBR4-210ENST00000466969 NF1P21359 2839 aa13.54□□□□□ -0.24
UBR4-210ENST00000466969 OTOGQ6ZRI0 2925 aa13.54□□□□□ -0.24
UBR4-210ENST00000466969 ANAPC1Q9H1A4 1944 aa13.54□□□□□ -0.24
UBR4-210ENST00000466969 WASH3PC4AMC7 463 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 VILLO15195 856 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 HOXC11O43248 304 aaPredicted RBP13.53□□□□□ -0.24
UBR4-210ENST00000466969 EFSO43281 561 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 PRPF3O43395 683 aaKnown RBP13.53□□□□□ -0.24
UBR4-210ENST00000466969 XPOTO43592 962 aaKnown RBP13.53□□□□□ -0.24
UBR4-210ENST00000466969 TRAK2O60296 914 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 CSO75390 466 aaKnown RBP13.53□□□□□ -0.24
UBR4-210ENST00000466969 IGLV3-19P01714 112 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 CYP11A1P05108 521 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 CYP3A5P20815 502 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 PAX3P23760 479 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 CD27P26842 260 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 GRNP28799 593 aaKnown RBP13.53□□□□□ -0.24
UBR4-210ENST00000466969 ARRB1P49407 418 aaPredicted RBP13.53□□□□□ -0.24
UBR4-210ENST00000466969 LILRA4P59901 499 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 SPAG1Q07617 926 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 SAFBQ15424 915 aaKnown RBP eCLIP13.53□□□□□ -0.24
UBR4-210ENST00000466969 C3orf38Q5JPI3 329 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 SLC46A1Q96NT5 459 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 PTPRHQ9HD43 1115 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 CFAP97Q9P2B7 532 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 SATB2Q9UPW6 733 aa13.53□□□□□ -0.24
UBR4-210ENST00000466969 A0A087WWV3 80 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 A1L4Q6 167 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 TRIM24O15164 1050 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 XRCC6P12956 609 aaKnown RBP eCLIP13.52□□□□□ -0.25
UBR4-210ENST00000466969 EPHA8P29322 1005 aaPredicted RBP13.52□□□□□ -0.25
UBR4-210ENST00000466969 DCTP40126 519 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 ZNF132P52740 706 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 OXCT1P55809 520 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 SLC7A9P82251 487 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 HNRNPUQ00839 825 aaKnown RBP eCLIP13.52□□□□□ -0.25
UBR4-210ENST00000466969 NFE2Q16621 373 aaPredicted RBP13.52□□□□□ -0.25
UBR4-210ENST00000466969 TBR1Q16650 682 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 DDX42Q86XP3 938 aaKnown RBP eCLIP13.52□□□□□ -0.25
UBR4-210ENST00000466969 SSC4DQ8WTU2 575 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 HAS1Q92839 578 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 BIRC7Q96CA5 298 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 OTUB2Q96DC9 234 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 HSD17B14Q9BPX1 270 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 MRPL4Q9BYD3 311 aaKnown RBP13.52□□□□□ -0.25
UBR4-210ENST00000466969 DNAJC17Q9NVM6 304 aaKnown RBP13.52□□□□□ -0.25
UBR4-210ENST00000466969 PCDHA4Q9UN74 947 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 PLAAQ9Y263 795 aa13.52□□□□□ -0.25
UBR4-210ENST00000466969 KLF18A0A0U1RQI7 1052 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 CYP26A1O43174 497 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 SYNCRIPO60506 623 aaKnown RBP13.51□□□□□ -0.25
UBR4-210ENST00000466969 FSBPO95073 299 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 BAG4O95429 457 aaKnown RBP13.51□□□□□ -0.25
UBR4-210ENST00000466969 BCAT1P54687 386 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 RACK1P63244 317 aaKnown RBP13.51□□□□□ -0.25
UBR4-210ENST00000466969 DAB2P98082 770 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 TSPY1Q01534 308 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 SHBQ15464 509 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 FHL5Q5TD97 284 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 CDCP2Q5VXM1 449 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 MPZL3Q6UWV2 235 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 KANSL1Q7Z3B3 1105 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 CACUL1Q86Y37 369 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 SLFN12Q8IYM2 578 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 HPS3Q969F9 1004 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 GDF3Q9NR23 364 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 TRPM5Q9NZQ8 1165 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 STON1Q9Y6Q2 735 aa13.51□□□□□ -0.25
UBR4-210ENST00000466969 MED13Q9UHV7 2174 aa13.5□□□□□ -0.25
UBR4-210ENST00000466969 PRRT4C9JH25 899 aa13.5□□□□□ -0.25
UBR4-210ENST00000466969 GCFC2P16383 781 aaKnown RBP13.5□□□□□ -0.25
UBR4-210ENST00000466969 DUSP3P51452 185 aaPredicted RBP13.5□□□□□ -0.25
UBR4-210ENST00000466969 SEZ6Q53EL9 994 aa13.5□□□□□ -0.25
UBR4-210ENST00000466969 ARL14Q8N4G2 192 aa13.5□□□□□ -0.25
UBR4-210ENST00000466969 XPO6Q96QU8 1125 aaKnown RBP13.5□□□□□ -0.25
UBR4-210ENST00000466969 TARS2Q9BW92 718 aaKnown RBP13.5□□□□□ -0.25
UBR4-210ENST00000466969 ADNPQ9H2P0 1102 aa13.5□□□□□ -0.25
UBR4-210ENST00000466969 PLEKHA5Q9HAU0 1116 aa13.5□□□□□ -0.25
UBR4-210ENST00000466969 SPHK2Q9NRA0 654 aa13.5□□□□□ -0.25
UBR4-210ENST00000466969 TP53BP1Q12888 1972 aaPredicted RBP13.49□□□□□ -0.25
UBR4-210ENST00000466969 NAV3Q8IVL0 2385 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms