RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 NMD3Q96D46 503 aaKnown RBP3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 SIGLEC11Q96RL6 698 aa3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 A1CFQ9NQ94 594 aaKnown RBP3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 ZNF580Q9UK33 172 aa3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 THRAP3Q9Y2W1 955 aaKnown RBP3.68□□□□□ -1.82
GTF3C3-209ENST00000466862 ZMYM2Q9UBW7 1377 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 LOC102723971A0A1B0GUV8 181 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 CAPN8A6NHC0 703 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 H7C4K7 107 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 PYCARD-AS1I3L0S3 204 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 TBC1D4O60343 1298 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 TLR2O60603 784 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 HGFP14210 728 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 PHKG2P15735 406 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 ZNF750Q32MQ0 723 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 C4orf46Q504U0 113 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 KLHL22Q53GT1 634 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 DCDC5Q6ZRR9 648 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 ZDHHC17Q8IUH5 632 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 METTL25Q8N6Q8 603 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 EDC3Q96F86 508 aaKnown RBP3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 ADGRE3Q9BY15 652 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 DHX36Q9H2U1 1008 aaKnown RBP3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 EBF3Q9H4W6 596 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 SNX15Q9NRS6 342 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 TFCP2L1Q9NZI6 479 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 ZIM2Q9NZV7 527 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 CPNE7Q9UBL6 633 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 LRP12Q9Y561 859 aa3.67□□□□□ -1.82
GTF3C3-209ENST00000466862 FAM90A10PA6NDY2 464 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 A8MVJ9 347 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 PSMD9O00233 223 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 PRPF3O43395 683 aaKnown RBP3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 TMPRSS11DO60235 418 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 TNFRSF1BP20333 461 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 HTR7P34969 479 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 PTDSS1P48651 473 aaKnown RBP3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 PLCD1P51178 756 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 COPB1P53618 953 aaKnown RBP3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 EPHB1P54762 984 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 GHRHRQ02643 423 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 CFHR3Q02985 330 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 DEUP1Q05D60 604 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 KCNB1Q14721 858 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 CNN3Q15417 329 aaKnown RBP3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 INSCQ1MX18 579 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 CACHD1Q5VU97 1274 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 CXorf57Q6NSI4 855 aaKnown RBP3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 USP49Q70CQ1 688 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 RAB11FIP4Q86YS3 637 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 RAVER1Q8IY67 606 aaKnown RBP3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 CUL5Q93034 780 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 SUCLG2Q96I99 432 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 ZBTB45Q96K62 511 aaPredicted RBP3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 CCDC17Q96LX7 622 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 SELENOOQ9BVL4 669 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 ZBTB40Q9NUA8 1239 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 TMEM184CQ9NVA4 438 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 COL20A1Q9P218 1284 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 SEMA5BQ9P283 1151 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 ASAP1Q9ULH1 1129 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 L1RE1Q9UN81 338 aa3.66□□□□□ -1.82
GTF3C3-209ENST00000466862 ISM1B1AKI9 464 aa3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 FGF2P09038 288 aa3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 PARP1P09874 1014 aaKnown RBP3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 CREB1P16220 341 aa3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 ACVR2AP27037 513 aa3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 NANOS2P60321 138 aaKnown RBP3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 GPC5P78333 572 aa3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 SLC14A1Q13336 389 aa3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 DENND2CQ68D51 928 aa3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 TMEM65Q6PI78 240 aa3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 C9orf47Q6ZRZ4 202 aa3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 ZSCAN32Q9NX65 697 aa3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 HEY2Q9UBP5 337 aa3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 AFF4Q9UHB7 1163 aaKnown RBP3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 USP22Q9UPT9 525 aa3.65□□□□□ -1.83
GTF3C3-209ENST00000466862 hCG_2014768A0A024R1R8 64 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 ANKRD62A6NC57 917 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 EXOC5O00471 708 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 PIAS2O75928 621 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 RNF8O76064 485 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 OAZ2O95190 189 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 RASAL1O95294 804 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 MBPP02686 304 aaPredicted RBP3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 TMEM191BP0C7N4 346 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 TXNP10599 105 aaKnown RBP3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 CTSAP10619 480 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 CYP19A1P11511 503 aaPredicted RBP3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 IBSPP21815 317 aaPredicted RBP3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 PRKAR1BP31321 381 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 THBS3P49746 956 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 MTHFSP49914 203 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 PGDP52209 483 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 COPAP53621 1224 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 SUMO3P55854 103 aaPredicted RBP3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 RPS16P62249 146 aaKnown RBP3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 YPEL5P62699 121 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 ID2Q02363 134 aa3.64□□□□□ -1.83
GTF3C3-209ENST00000466862 ARHGEF7Q14155 803 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms