RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 UNC93AQ86WB7 457 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 ZNF687Q8N1G0 1237 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 CPA6Q8N4T0 437 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 SLC2A14Q8TDB8 520 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 SLC35C1Q96A29 364 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 EXOC4Q96A65 974 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 IER2Q9BTL4 223 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 TTLL2Q9BWV7 592 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 NAA15Q9BXJ9 866 aaKnown RBP16.93■□□□□ 0.3
COL16A1-207ENST00000466829 NIF3L1Q9GZT8 377 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 CYP3A43Q9HB55 503 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 HPS4Q9NQG7 708 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 GCNT4Q9P109 453 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 HMGXB4Q9UGU5 601 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 WNT6Q9Y6F9 365 aa16.93■□□□□ 0.3
COL16A1-207ENST00000466829 MFAP3LO75121 409 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 SKILP12757 684 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 ADORA2BP29275 332 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 CASP14P31944 242 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 CXCL12P48061 93 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 MXI1P50539 228 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 NRLP54845 237 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 CCZ1BP86790 482 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 CCZ1P86791 482 aaPredicted RBP16.92■□□□□ 0.3
COL16A1-207ENST00000466829 LRMPQ12912 555 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 NR1H3Q13133 447 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 C12orf29Q8N999 325 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 PDZD8Q8NEN9 1154 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 RIN3Q8TB24 985 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 OSCP1Q8WVF1 389 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 ATP2A3Q93084 1043 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 PCMTD1Q96MG8 357 aaPredicted RBP16.92■□□□□ 0.3
COL16A1-207ENST00000466829 NT5C1AQ9BXI3 368 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 NACA2Q9H009 215 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 APOBEC3GQ9HC16 384 aaKnown RBP16.92■□□□□ 0.3
COL16A1-207ENST00000466829 TMEM30AQ9NV96 361 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 ZSCAN32Q9NX65 697 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 SMPD4Q9NXE4 827 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 CHORDC1Q9UHD1 332 aaPredicted RBP16.92■□□□□ 0.3
COL16A1-207ENST00000466829 ARHGAP26Q9UNA1 814 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 LUC7L2Q9Y383 392 aaKnown RBP16.92■□□□□ 0.3
COL16A1-207ENST00000466829 PCDHGA2Q9Y5H1 932 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 F5P12259 2224 aa16.92■□□□□ 0.3
COL16A1-207ENST00000466829 PMM2O15305 246 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 P4HA2O15460 535 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 FAM200BP0CF97 657 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 MBL2P11226 248 aaPredicted RBP16.91■□□□□ 0.3
COL16A1-207ENST00000466829 PFKLP17858 780 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 SLC5A3P53794 718 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 ADKP55263 362 aaKnown RBP16.91■□□□□ 0.3
COL16A1-207ENST00000466829 MAP3K7CLP57077 242 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 ZNF77Q15935 545 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 TSR1Q2NL82 804 aaKnown RBP16.91■□□□□ 0.3
COL16A1-207ENST00000466829 FUKQ8N0W3 1084 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 CRYBG2Q8N1P7 616 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 SPEM1Q8N4L4 309 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 FBXL13Q8NEE6 735 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 ZNF397Q8NF99 534 aaPredicted RBP16.91■□□□□ 0.3
COL16A1-207ENST00000466829 SCAMP5Q8TAC9 235 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 KIAA1524Q8TCG1 905 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 CPLX3Q8WVH0 158 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 JAKMIP2Q96AA8 810 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 TTYH3Q9C0H2 523 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 ECT2Q9H8V3 914 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 PRMT8Q9NR22 394 aaPredicted RBP16.91■□□□□ 0.3
COL16A1-207ENST00000466829 MIA3Q5JRA6 1907 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 TICRRQ7Z2Z1 1910 aa16.91■□□□□ 0.3
COL16A1-207ENST00000466829 OTOL1A6NHN0 477 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-207ENST00000466829 LEFTY2O00292 366 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 ZNF500O60304 480 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-207ENST00000466829 FECHP22830 423 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 KRT9P35527 623 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 ZBED6P86452 979 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 SATB1Q01826 763 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 KCNMA1Q12791 1236 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 USP4Q13107 963 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 ZNF394Q53GI3 561 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 GBP6Q6ZN66 633 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 Q6ZS52 159 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 PAQR9Q6ZVX9 377 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 NEK11Q8NG66 645 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 OR8K1Q8NGG5 319 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 BAG1Q99933 345 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-207ENST00000466829 FAM126AQ9BYI3 521 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-207ENST00000466829 RNF38Q9H0F5 515 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 LINC00597Q9H2U6 94 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 PLCB1Q9NQ66 1216 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 RAB20Q9NX57 234 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 DAAM1Q9Y4D1 1078 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 CPQQ9Y646 472 aa16.9■□□□□ 0.3
COL16A1-207ENST00000466829 NFATC1O95644 943 aa16.89■□□□□ 0.29
COL16A1-207ENST00000466829 EXOC3L4Q17RC7 722 aa16.89■□□□□ 0.29
COL16A1-207ENST00000466829 HECTD3Q5T447 861 aa16.89■□□□□ 0.29
COL16A1-207ENST00000466829 SYNPOQ8N3V7 929 aa16.89■□□□□ 0.29
COL16A1-207ENST00000466829 OVCA2Q8WZ82 227 aa16.89■□□□□ 0.29
COL16A1-207ENST00000466829 SEMA4DQ92854 862 aa16.89■□□□□ 0.29
COL16A1-207ENST00000466829 CYFIP2Q96F07 1278 aa16.89■□□□□ 0.29
COL16A1-207ENST00000466829 HEXIM2Q96MH2 286 aaKnown RBP16.89■□□□□ 0.29
COL16A1-207ENST00000466829 DNAJC7Q99615 494 aa16.89■□□□□ 0.29
COL16A1-207ENST00000466829 SMOQ99835 787 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms