RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 FOXP3Q9BZS1 431 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 SPATC1LQ9H0A9 340 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 FBXO2Q9UK22 296 aaPredicted RBP8.99□□□□□ -0.97
HPS4-209ENST00000466781 EIF4E1BA6NMX2 242 aaKnown RBP8.99□□□□□ -0.97
HPS4-209ENST00000466781 TEX28O15482 410 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 CST8O60676 142 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 CPSF4O95639 269 aaKnown RBP8.99□□□□□ -0.97
HPS4-209ENST00000466781 UCHL3P15374 230 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 KBTBD12Q3ZCT8 623 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 KRT77Q7Z794 578 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 MIB1Q86YT6 1006 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 OSCP1Q8WVF1 389 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 PI4K2AQ9BTU6 479 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 ADGRE3Q9BY15 652 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 CCSER1Q9C0I3 900 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 PDGFCQ9NRA1 345 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 FBXO10Q9UK96 956 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 hCG_2014768A0A024R1R8 64 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 B3GAT3O94766 335 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 AMHP03971 560 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 MSH3P20585 1137 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 TGM2P21980 687 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 TSGA10IPQ3SY00 556 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 FAM9CQ8IZT9 166 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 CNBD2Q96M20 576 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 TRIM9Q9C026 710 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 SLC12A8A0AV02 714 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 RHOBTB3O94955 611 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 ALBP02768 609 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 DNAJB2P25686 324 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 KLRC2P26717 231 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 WEE1P30291 646 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 MAGEA4P43358 317 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 EFEMP1Q12805 493 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 ITGA9Q13797 1035 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 CCDC144BQ3MJ40 725 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 DAB2IPQ5VWQ8 1189 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 RIBC1Q8N443 379 aaPredicted RBP8.99□□□□□ -0.97
HPS4-209ENST00000466781 ENGASEQ8NFI3 743 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 DTX3LQ8TDB6 740 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 FAM118BQ9BPY3 351 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 PRRG3Q9BZD7 231 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 UBE2OQ9C0C9 1292 aaKnown RBP8.99□□□□□ -0.97
HPS4-209ENST00000466781 IL25Q9H293 177 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 TUBE1Q9UJT0 475 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 DBR1Q9UK59 544 aaKnown RBP8.99□□□□□ -0.97
HPS4-209ENST00000466781 RUVBL2Q9Y230 463 aaKnown RBP8.99□□□□□ -0.97
HPS4-209ENST00000466781 E9PBE3 544 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 M0R3G1 203 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 ATMINO43313 823 aaPredicted RBP8.99□□□□□ -0.97
HPS4-209ENST00000466781 CDH16O75309 829 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 IFNA14P01570 189 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 PTPN3P26045 913 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 SERPINB8P50452 374 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 VGLL4Q14135 290 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 COMMD2Q86X83 199 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 GMCL1Q96IK5 515 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 CPB2Q96IY4 423 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 MAGED4Q96JG8 741 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 PXMP2Q9NR77 195 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 TLR8Q9NR97 1041 aaKnown RBP8.99□□□□□ -0.97
HPS4-209ENST00000466781 FBXO28Q9NVF7 368 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 NDOR1Q9UHB4 597 aa8.99□□□□□ -0.97
HPS4-209ENST00000466781 GNG14A0A1W2PPG7 69 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 TBKBP1A7MCY6 615 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 STAU1O95793 577 aaKnown RBP8.98□□□□□ -0.97
HPS4-209ENST00000466781 HOXA10P31260 410 aaPredicted RBP8.98□□□□□ -0.97
HPS4-209ENST00000466781 LRRC36Q1X8D7 754 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 TMC7Q7Z402 723 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 CYP4Z2PQ8N1L4 340 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 MIER2Q8N344 545 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 SPATA4Q8NEY3 305 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 CCDC126Q96EE4 140 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 SYT17Q9BSW7 474 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 KCNH7Q9NS40 1196 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 TBX20Q9UMR3 447 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 KLHL20Q9Y2M5 609 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 MRFAP1Q9Y605 127 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 ENDOD1O94919 500 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 ACO1P21399 889 aaKnown RBP8.98□□□□□ -0.97
HPS4-209ENST00000466781 PSMA4P25789 261 aaKnown RBP8.98□□□□□ -0.97
HPS4-209ENST00000466781 LHX1P48742 406 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 FNTAP49354 379 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 CUL2Q13617 745 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 AGGF1Q8N302 714 aaeCLIP8.98□□□□□ -0.97
HPS4-209ENST00000466781 E2F7Q96AV8 911 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 C19orf60Q96EN9 201 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 THTPAQ9BU02 230 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 OXCT2Q9BYC2 517 aaPredicted RBP8.98□□□□□ -0.97
HPS4-209ENST00000466781 KIAA1683Q9H0B3 1180 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 SEPT3Q9UH03 358 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 GGT7Q9UJ14 662 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 COMTP21964 271 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 SOX6P35712 828 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 ERFP50548 548 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 NAB2Q15742 525 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 MROH9Q5TGP6 573 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 RD3Q7Z3Z2 195 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 KCTD17Q8N5Z5 321 aa8.98□□□□□ -0.97
HPS4-209ENST00000466781 POMGNT2Q8NAT1 580 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms