RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 RNF38Q9H0F5 515 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 VPS16Q9H269 839 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 FBXO44Q9H4M3 255 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 ANO10Q9NW15 660 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 DUS2Q9NX74 493 aaKnown RBP10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 KIAA1549LQ6ZVL6 1849 aa10.27□□□□□ -0.77
RTFDC1-205ENST00000466260 A0A1W2PQH9 124 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 FAM170AA1A519 330 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 SYCE3A1L190 88 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 GOLGA6L6A8MZA4 724 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 SPECC1L-ADORA2AF8WAN1 911 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 ARNTLO00327 626 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 COCHO43405 550 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 TLR5O60602 858 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 PNMA6AP0CW24 399 aaPredicted RBP10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 VDRP11473 427 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 GLULP15104 373 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 PPP3CCP48454 512 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 PDE6CP51160 858 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 BCAT1P54687 386 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 SLC8A3P57103 927 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 ZXDBP98169 803 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 BST2Q10589 180 aaKnown RBP10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 ZNF268Q14587 947 aaPredicted RBP10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 PON2Q15165 354 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 VWA3BQ502W6 1294 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 HECTD3Q5T447 861 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 ARHGAP17Q68EM7 881 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 TXNDC11Q6PKC3 985 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 ZNF852Q6ZMS4 543 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 RBM43Q6ZSC3 357 aaKnown RBP10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 TFAP2BQ92481 460 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 NDRG1Q92597 394 aaKnown RBP10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 NMUR1Q9HB89 426 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 LRRC4Q9HBW1 653 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 ACP6Q9NPH0 428 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 HPS4Q9NQG7 708 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 TLR8Q9NR97 1041 aaKnown RBP10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 RBM12Q9NTZ6 932 aaKnown RBP10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 CFAP97Q9P2B7 532 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 NAGPAQ9UK23 515 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 AJAP1Q9UKB5 411 aaPredicted RBP10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 ARHGAP26Q9UNA1 814 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 SH3BP1Q9Y3L3 701 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 ZDBF2Q9HCK1 2354 aa10.26□□□□□ -0.77
RTFDC1-205ENST00000466260 O00370 1275 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 PMM2O15305 246 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 THAP12O43422 761 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 TBX18O95935 607 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 TPM2P07951 284 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 HMBSP08397 361 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 RARGP13631 454 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 LCP1P13796 627 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 HOXB3P14651 431 aaPredicted RBP10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 WEE1P30291 646 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 CTHP32929 405 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 TKTL1P51854 596 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 KIF11P52732 1056 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 MFAP3P55082 362 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 GCNT1Q02742 428 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 TYRO3Q06418 890 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 ADIGQ0VDE8 80 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 TCF15Q12870 199 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 RUNX3Q13761 415 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 ITPRIPL2Q3MIP1 535 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 TCP11X2Q5H9J9 407 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 MIIPQ5JXC2 388 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 AOPEPQ8N6M6 819 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 ANKRD52Q8NB46 1076 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 DTWD2Q8NBA8 298 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 OVCA2Q8WZ82 227 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 SECISBP2LQ93073 1101 aaKnown RBP10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 LSM14BQ9BX40 385 aaKnown RBP10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 ULBP1Q9BZM6 244 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 NDST4Q9H3R1 872 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 PNPLA8Q9NP80 782 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 SPATA6Q9NWH7 488 aaPredicted RBP10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 COMMD8Q9NX08 183 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 OSER1Q9NX31 292 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 APEX2Q9UBZ4 518 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 RASAL2Q9UJF2 1139 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 MRPS17Q9Y2R5 130 aaKnown RBP10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 PCDHGA4Q9Y5G9 962 aa10.25□□□□□ -0.77
RTFDC1-205ENST00000466260 OTOL1A6NHN0 477 aaPredicted RBP10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 SHISA7A6NL88 538 aa10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 SOBPA7XYQ1 873 aa10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 MAN2B1O00754 1011 aa10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 XPO1O14980 1071 aaKnown RBP10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 OLFM2O95897 454 aa10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 PTMAP06454 111 aaKnown RBP10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 PAEPP09466 180 aa10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 PON1P27169 355 aa10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 GNA15P30679 374 aa10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 MLLT3P42568 568 aaPredicted RBP10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 PTPN5P54829 565 aa10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 SLC7A9P82251 487 aa10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 MYL5Q02045 173 aa10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 EFEMP1Q12805 493 aa10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 RAPGEF1Q13905 1077 aa10.24□□□□□ -0.77
RTFDC1-205ENST00000466260 KRT31Q15323 416 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms