RNA–Protein interactions for RNA: ENST00000466233.1

CHD3-207, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 4

Gene CHD3, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-207ENST00000466233 TTC16Q8NEE8 873 aa14.33□□□□□ -0.12
CHD3-207ENST00000466233 MDGA1Q8NFP4 955 aa14.33□□□□□ -0.12
CHD3-207ENST00000466233 SCAMP5Q8TAC9 235 aa14.33□□□□□ -0.12
CHD3-207ENST00000466233 SPACA7Q96KW9 195 aa14.33□□□□□ -0.12
CHD3-207ENST00000466233 MED10Q9BTT4 135 aa14.33□□□□□ -0.12
CHD3-207ENST00000466233 IMPG2Q9BZV3 1241 aa14.33□□□□□ -0.12
CHD3-207ENST00000466233 SPHK2Q9NRA0 654 aa14.33□□□□□ -0.12
CHD3-207ENST00000466233 MARK1Q9P0L2 795 aa14.33□□□□□ -0.12
CHD3-207ENST00000466233 DEC1Q9P2X7 70 aa14.33□□□□□ -0.12
CHD3-207ENST00000466233 CHORDC1Q9UHD1 332 aaPredicted RBP14.33□□□□□ -0.12
CHD3-207ENST00000466233 SERTAD1Q9UHV2 236 aa14.33□□□□□ -0.12
CHD3-207ENST00000466233 SCML2Q9UQR0 700 aa14.33□□□□□ -0.12
CHD3-207ENST00000466233 PCDHA5Q9Y5H7 936 aa14.33□□□□□ -0.12
CHD3-207ENST00000466233 KHNYNO15037 678 aaKnown RBP14.32□□□□□ -0.12
CHD3-207ENST00000466233 RHOBTB3O94955 611 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 RPL13P26373 211 aaKnown RBP14.32□□□□□ -0.12
CHD3-207ENST00000466233 GBP1P32455 592 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 GTF2H1P32780 548 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 CREB5Q02930 508 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 DNM1Q05193 864 aaKnown RBP14.32□□□□□ -0.12
CHD3-207ENST00000466233 E2F5Q15329 346 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 ANO7Q6IWH7 933 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 LPCAT2Q7L5N7 544 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 TADA2BQ86TJ2 420 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 ACOT1Q86TX2 421 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 ZMIZ2Q8NF64 920 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 CDK5RAP1Q96SZ6 601 aaKnown RBP14.32□□□□□ -0.12
CHD3-207ENST00000466233 SMOQ99835 787 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 KRT82Q9NSB4 513 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 RXFP3Q9NSD7 469 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 POLR3BQ9NW08 1133 aaPredicted RBP14.32□□□□□ -0.12
CHD3-207ENST00000466233 WDR35Q9P2L0 1181 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 ANGPTL2Q9UKU9 493 aa14.32□□□□□ -0.12
CHD3-207ENST00000466233 GREM1O60565 184 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 TLR5O60602 858 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 KCNK5O95279 499 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 FAM200BP0CF97 657 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 PFKFB1P16118 471 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 CSRP1P21291 193 aaKnown RBP14.31□□□□□ -0.12
CHD3-207ENST00000466233 ATP5C1P36542 298 aaKnown RBP14.31□□□□□ -0.12
CHD3-207ENST00000466233 ASPAP45381 313 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 SLC6A11P48066 632 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 VAMP7P51809 220 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 NDST1P52848 882 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 SEC13P55735 322 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 LMAN2Q12907 356 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 N4BP2L1Q5TBK1 243 aaPredicted RBP14.31□□□□□ -0.12
CHD3-207ENST00000466233 PEAR1Q5VY43 1037 aaPredicted RBP14.31□□□□□ -0.12
CHD3-207ENST00000466233 TMEM92Q6UXU6 159 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 GUF1Q8N442 669 aaKnown RBP14.31□□□□□ -0.12
CHD3-207ENST00000466233 ALLCQ8N6M5 410 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 TXNDC5Q8NBS9 432 aaKnown RBP14.31□□□□□ -0.12
CHD3-207ENST00000466233 SLC2A14Q8TDB8 520 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 CCDC34Q96HJ3 373 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 EDEM2Q9BV94 578 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 NT5C1AQ9BXI3 368 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 KLF16Q9BXK1 252 aaPredicted RBP14.31□□□□□ -0.12
CHD3-207ENST00000466233 UBXN6Q9BZV1 441 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 NACA2Q9H009 215 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 SDCBP2Q9H190 292 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.31□□□□□ -0.12
CHD3-207ENST00000466233 ATP6V1DQ9Y5K8 247 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 KIAA1549LQ6ZVL6 1849 aa14.31□□□□□ -0.12
CHD3-207ENST00000466233 CNOT1A5YKK6 2376 aaKnown RBP14.31□□□□□ -0.12
CHD3-207ENST00000466233 A0A1W2PQ27 194 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 A0A1W2PQ64 194 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 A0A1W2PQD8 194 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 LNP1A1A4G5 178 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 TBC1D3BA6NDS4 549 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 SGK1O00141 431 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 GFRA2O00451 464 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 DCLK1O15075 740 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 NPC1O15118 1278 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 CACNG3O60359 315 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 ADAM23O75077 832 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 TULP3O75386 442 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 KLF8O95600 359 aaPredicted RBP14.3□□□□□ -0.12
CHD3-207ENST00000466233 CEACAM1P13688 526 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 PLA2G4AP47712 749 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 ZNF132P52740 706 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 DLG4P78352 724 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 KRT85P78386 507 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 C1orf220Q5T0J3 134 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 SLC36A4Q6YBV0 504 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 CYP2U1Q7Z449 544 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 RABEPKQ7Z6M1 372 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 C12orf40Q86WS4 652 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 SYT12Q8IV01 421 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 BBS7Q8IWZ6 715 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 CCDC33Q8N5R6 958 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 TERB1Q8NA31 727 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 CCDC150Q8NCX0 1101 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 XPO6Q96QU8 1125 aaKnown RBP14.3□□□□□ -0.12
CHD3-207ENST00000466233 SCAND2PQ9GZW5 306 aaPredicted RBP14.3□□□□□ -0.12
CHD3-207ENST00000466233 CCSER2Q9H7U1 834 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 TMEM9BQ9NQ34 198 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 CLIC5Q9NZA1 410 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 GMIPQ9P107 970 aa14.3□□□□□ -0.12
CHD3-207ENST00000466233 LSM7Q9UK45 103 aaKnown RBP14.3□□□□□ -0.12
CHD3-207ENST00000466233 ZNF510Q9Y2H8 683 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms