RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 VPS45Q9NRW7 570 aa13.2□□□□□ -0.3
SOX2-OT-203ENST00000466034 KRT82Q9NSB4 513 aa13.2□□□□□ -0.3
SOX2-OT-203ENST00000466034 GMIPQ9P107 970 aa13.2□□□□□ -0.3
SOX2-OT-203ENST00000466034 CHORDC1Q9UHD1 332 aaPredicted RBP13.2□□□□□ -0.3
SOX2-OT-203ENST00000466034 ACACBO00763 2458 aa13.2□□□□□ -0.3
SOX2-OT-203ENST00000466034 MYH10P35580 1976 aa13.2□□□□□ -0.3
SOX2-OT-203ENST00000466034 A0A1W2PQ27 194 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 A0A1W2PQ64 194 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 A0A1W2PQD8 194 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 HOXC11O43248 304 aaPredicted RBP13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 CLSTN1O94985 981 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 KAT7O95251 611 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 APODP05090 189 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 CCDC130P13994 396 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 MPLP40238 635 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 GRIA2P42262 883 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 TNFRSF4P43489 277 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 SLC6A11P48066 632 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 VAMP7P51809 220 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 NDUFA8P51970 172 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 DGKEP52429 567 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 GAD2Q05329 585 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 CRY1Q16526 586 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 C2orf27AQ580R0 203 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 PPM1JQ5JR12 505 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 CEP135Q66GS9 1140 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 INTS8Q75QN2 995 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 C12orf40Q86WS4 652 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 ETFBKMTQ8IXQ9 262 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 PHTF2Q8N3S3 785 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 GUF1Q8N442 669 aaKnown RBP13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 SLC2A14Q8TDB8 520 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 ELMO3Q96BJ8 720 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 CCSER2Q9H7U1 834 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 CYP3A43Q9HB55 503 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 HMGXB4Q9UGU5 601 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 SH3BP1Q9Y3L3 701 aa13.19□□□□□ -0.3
SOX2-OT-203ENST00000466034 BCLAF3A2AJT9 711 aaKnown RBP13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 TM4SF5O14894 197 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 BEST1O76090 585 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 FAM200BP0CF97 657 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 TRIM21P19474 475 aaKnown RBP13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 NR2F2P24468 414 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 PIK3CAP42336 1068 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 KIR2DL1P43626 348 aaPredicted RBP13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 SEC13P55735 322 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 MESP2Q0VG99 397 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 PREPLQ4J6C6 727 aaPredicted RBP13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 USP39Q53GS9 565 aaKnown RBP13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 LY6G5CQ5SRR4 150 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 PMS2CLQ68D20 193 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 IL31Q6EBC2 164 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 SPOPLQ6IQ16 392 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 KRBA2Q6ZNG9 492 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 OLIG1Q8TAK6 271 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 KCNV2Q8TDN2 545 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 FAXDC2Q96IV6 333 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 HNRNPABQ99729 332 aaKnown RBP13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 IMPG2Q9BZV3 1241 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 SCAND2PQ9GZW5 306 aaPredicted RBP13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 PNPLA8Q9NP80 782 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 CYLDQ9NQC7 956 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 ARHGEF4Q9NR80 690 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 TLR8Q9NR97 1041 aaKnown RBP13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 SCML2Q9UQR0 700 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 ATP6V1DQ9Y5K8 247 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 LAMA1P25391 3075 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 ABCA7Q8IZY2 2146 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 EPG5Q9HCE0 2579 aa13.18□□□□□ -0.3
SOX2-OT-203ENST00000466034 MYO18AQ92614 2054 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 PLXND1Q9Y4D7 1925 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 NUP205Q92621 2012 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 ANTXRLA6NF34 631 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 HHLA1C9JL84 531 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 SCAMP3O14828 347 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 DCLK1O15075 740 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 GREM1O60565 184 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 TLR5O60602 858 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 ALDH1A2O94788 518 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 RPL13P26373 211 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 PSMC2P35998 433 aaKnown RBP13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 MAP3K7CLP57077 242 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 PPP3CAQ08209 521 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 ORC1Q13415 861 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 CCDC6Q16204 474 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 ZCWPW2Q504Y3 356 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 EOGTQ5NDL2 527 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 TMEM92Q6UXU6 159 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 CLEC20AQ6ZU45 233 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 HTR3DQ70Z44 454 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 SFTPA1Q8IWL2 248 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 BBS7Q8IWZ6 715 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 FAM186BQ8IYM0 893 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 C12orf29Q8N999 325 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 IL17RCQ8NAC3 791 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 MDGA1Q8NFP4 955 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 TWNKQ96RR1 684 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 NT5C1AQ9BXI3 368 aa13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 KLF16Q9BXK1 252 aaPredicted RBP13.17□□□□□ -0.3
SOX2-OT-203ENST00000466034 TPSD1Q9BZJ3 242 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms