RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 SMC3Q9UQE7 1217 aa5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 TDRD15B5MCY1 1934 aaKnown RBP5.33□□□□□ -1.56
EXOSC3-204ENST00000465860 C9orf118A6NHY6 69 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 E9PMD0 336 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 M0QZ92 97 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 MAGEB2O15479 319 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 MARCH6O60337 910 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 DLX3O60479 287 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 EFCAB14O75071 495 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 LYPLA2O95372 231 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 BAG4O95429 457 aaKnown RBP5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 AMHP03971 560 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 CYP1A1P04798 512 aaPredicted RBP5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 OR52Z1P0C646 297 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 SRGAP2CP0DJJ0 459 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 FGFR1P11362 822 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 DARSP14868 501 aaKnown RBP5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 SYT1P21579 422 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 DNAJB1P25685 340 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 HOXA11P31270 313 aaPredicted RBP5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 RARRES1P49788 294 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 ERVK-21P61565 698 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 ATP2C1P98194 919 aaPredicted RBP5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 LAMTOR4Q0VGL1 99 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 RESTQ13127 1097 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 CAMK1Q14012 370 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 LONRF3Q496Y0 759 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 PAN2Q504Q3 1202 aaKnown RBP5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 EPC2Q52LR7 807 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 LRRC55Q6ZSA7 311 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 MAEAQ7L5Y9 396 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 LIMS2Q7Z4I7 341 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 TTC9BQ8N6N2 239 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 LPPQ93052 612 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 MBD6Q96DN6 1003 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 NLRP4Q96MN2 994 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 C8orf49Q96NF6 230 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 CLIC6Q96NY7 704 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 NAP1L4Q99733 375 aaKnown RBP5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 POLR3CQ9BUI4 534 aaPredicted RBP5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 SMOC1Q9H4F8 434 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 ZSWIM4Q9H7M6 989 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 RGS18Q9NS28 235 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 GPR27Q9NS67 375 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 ASH2LQ9UBL3 628 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 LRWD1Q9UFC0 647 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 CROTQ9UKG9 612 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 INSL6Q9Y581 213 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 COL4A3BPQ9Y5P4 624 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 MTCH2Q9Y6C9 303 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 MRPL42Q9Y6G3 142 aaKnown RBP5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 SQORQ9Y6N5 450 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 TRIOO75962 3097 aa5.32□□□□□ -1.56
EXOSC3-204ENST00000465860 ADGRA3Q8IWK6 1321 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 NCOR1O75376 2440 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 VPS37CA5D8V6 355 aaPredicted RBP5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 H3BQV1 296 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 GRM6O15303 877 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 B4GALT5O43286 388 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 USO1O60763 962 aaKnown RBP5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 CSPG5O95196 566 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 GLRA2P23416 452 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 RPA1P27694 616 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 DNAJA1P31689 397 aaKnown RBP5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 ARL2P36404 184 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 CCT6AP40227 531 aaKnown RBP5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 PBX3P40426 434 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 TRAPPC10P48553 1259 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 MCM2P49736 904 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 POLGP54098 1239 aaPredicted RBP5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 FAM189BP81408 668 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 TFF2Q03403 129 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 PKP1Q13835 747 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 CAPSQ13938 189 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 PTPAQ15257 358 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 CLLU1OSQ5K130 101 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 SPECC1Q5M775 1068 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 CPZQ66K79 652 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 TMC5Q6UXY8 1006 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 USP49Q70CQ1 688 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 USP53Q70EK8 1073 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 CDR2LQ86X02 465 aaPredicted RBP5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 DAW1Q8N136 415 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 PIP4K2CQ8TBX8 421 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 PHOSPHO1Q8TCT1 267 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 ZCCHC14Q8WYQ9 949 aaKnown RBP5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 TNPO1Q92973 898 aaKnown RBP5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 CPB2Q96IY4 423 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 CASD1Q96PB1 797 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 TGS1Q96RS0 853 aaKnown RBP5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 MAP7D2Q96T17 732 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 YME1L1Q96TA2 773 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 PLIN2Q99541 437 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 EIF2AQ9BY44 585 aaKnown RBP5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 CXCL16Q9H2A7 254 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 TMPRSS5Q9H3S3 457 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 CWH43Q9H720 699 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 L2HGDHQ9H9P8 463 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 ANKEF1Q9NU02 776 aa5.31□□□□□ -1.56
EXOSC3-204ENST00000465860 MTMR6Q9Y217 621 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms