RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 KLC2Q9H0B6 622 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 MROH8Q9H579 483 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 FAM124BQ9H5Z6 455 aaPredicted RBP19.08■□□□□ 0.64
SYNE4-204ENST00000465425 ALG13Q9NP73 1137 aaKnown RBP19.08■□□□□ 0.64
SYNE4-204ENST00000465425 C15orf41Q9Y2V0 281 aa19.08■□□□□ 0.64
SYNE4-204ENST00000465425 CFAP69A5D8W1 941 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 TGM2P21980 687 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 OSBPP22059 807 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 SDC4P31431 198 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 OVGP1Q12889 678 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 SPDYAQ5MJ70 313 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 IFNLR1Q8IU57 520 aaPredicted RBP19.07■□□□□ 0.64
SYNE4-204ENST00000465425 ANKRD13AQ8IZ07 590 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 UTP4Q969X6 686 aaKnown RBP19.07■□□□□ 0.64
SYNE4-204ENST00000465425 TSSK1BQ9BXA7 367 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 IQCGQ9H095 443 aaKnown RBP19.07■□□□□ 0.64
SYNE4-204ENST00000465425 CBX6O95503 412 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 FAAP100Q0VG06 881 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 LAMC2Q13753 1193 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 TTLL12Q14166 644 aaPredicted RBP19.07■□□□□ 0.64
SYNE4-204ENST00000465425 CCDC14Q49A88 953 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 GJC2Q5T442 439 aaPredicted RBP19.07■□□□□ 0.64
SYNE4-204ENST00000465425 MTDHQ86UE4 582 aaKnown RBP19.07■□□□□ 0.64
SYNE4-204ENST00000465425 CTAGE3PQ8IX95 158 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 FAM172AQ8WUF8 416 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 CXorf56Q9H5V9 222 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 USP29Q9HBJ7 922 aa19.07■□□□□ 0.64
SYNE4-204ENST00000465425 GBA2Q9HCG7 927 aaPredicted RBP19.07■□□□□ 0.64
SYNE4-204ENST00000465425 A0A0G2JND7 137 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 NT5DC4Q86YG4 428 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 ZNF276Q8N554 614 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 TTC17Q96AE7 1141 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 SERAC1Q96JX3 654 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 FAM111AQ96PZ2 611 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 GPATCH2LQ9NWQ4 482 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 WFS1O76024 890 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 STAU1O95793 577 aaKnown RBP19.06■□□□□ 0.64
SYNE4-204ENST00000465425 APRTP07741 180 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 PYGBP11216 843 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 RBL1P28749 1068 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 GCLCP48506 637 aaPredicted RBP19.06■□□□□ 0.64
SYNE4-204ENST00000465425 ARHGAP1Q07960 439 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 PPP1R26Q5T8A7 1209 aaPredicted RBP19.06■□□□□ 0.64
SYNE4-204ENST00000465425 ARMCX2Q7L311 632 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 SLC26A11Q86WA9 606 aa19.06■□□□□ 0.64
SYNE4-204ENST00000465425 ADARB2Q9NS39 739 aaKnown RBP19.06■□□□□ 0.64
SYNE4-204ENST00000465425 MCM3APO60318 1980 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 LOC102724159A0A0B4J2E5 919 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 SPDYE5A6NIY4 337 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 MAP3K6O95382 1288 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 PFKMP08237 780 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 T-ENOLP0DO92 83 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 PWP2Q15269 919 aaKnown RBP19.05■□□□□ 0.64
SYNE4-204ENST00000465425 PLEKHG4Q58EX7 1191 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 PMF1Q6P1K2 205 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 OLFML1Q6UWY5 402 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 CLNKQ7Z7G1 428 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 LRRC6Q86X45 466 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 PPM1NQ8N819 430 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 TEKT4Q8WW24 435 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 PTPRN2Q92932 1015 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 TBCBQ99426 244 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 PCDH18Q9HCL0 1135 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 ZC3H7BQ9UGR2 993 aaKnown RBP19.05■□□□□ 0.64
SYNE4-204ENST00000465425 OTOFQ9HC10 1997 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 DPYSL4O14531 572 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 KRT37O76014 449 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 DDNO94850 711 aaPredicted RBP19.05■□□□□ 0.64
SYNE4-204ENST00000465425 ZNF286BP0CG31 522 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 IL4RP24394 825 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 SNX16P57768 344 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 YWHAZP63104 245 aaKnown RBP19.05■□□□□ 0.64
SYNE4-204ENST00000465425 SLC18A2Q05940 514 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 PPP6R3Q5H9R7 873 aaPredicted RBP19.05■□□□□ 0.64
SYNE4-204ENST00000465425 FAM182AQ5T1J6 154 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 FAXCQ5TGI0 409 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 TTC39BQ5VTQ0 682 aaPredicted RBP19.05■□□□□ 0.64
SYNE4-204ENST00000465425 CHSY1Q86X52 802 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 LINC01465Q8N7H1 131 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 RFWD2Q8NHY2 731 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 SLC7A6OSQ96CW6 309 aaPredicted RBP19.05■□□□□ 0.64
SYNE4-204ENST00000465425 RTP4Q96DX8 246 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 SNRNP25Q9BV90 132 aaKnown RBP19.05■□□□□ 0.64
SYNE4-204ENST00000465425 TBC1D10AQ9BXI6 508 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 FAM49BQ9NUQ9 324 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 HESX1Q9UBX0 185 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 SNX9Q9Y5X1 595 aa19.05■□□□□ 0.64
SYNE4-204ENST00000465425 TSPAN1O60635 241 aa19.04■□□□□ 0.64
SYNE4-204ENST00000465425 HNRNPCL1O60812 293 aaKnown RBP19.04■□□□□ 0.64
SYNE4-204ENST00000465425 DIAPH2O60879 1101 aa19.04■□□□□ 0.64
SYNE4-204ENST00000465425 NEK3P51956 506 aa19.04■□□□□ 0.64
SYNE4-204ENST00000465425 SLC6A3Q01959 620 aa19.04■□□□□ 0.64
SYNE4-204ENST00000465425 LGSNQ5TDP6 509 aa19.04■□□□□ 0.64
SYNE4-204ENST00000465425 ACOT1Q86TX2 421 aa19.04■□□□□ 0.64
SYNE4-204ENST00000465425 LONP2Q86WA8 852 aa19.04■□□□□ 0.64
SYNE4-204ENST00000465425 SCUBE3Q8IX30 993 aa19.04■□□□□ 0.64
SYNE4-204ENST00000465425 PQLC3Q8N755 202 aa19.04■□□□□ 0.64
SYNE4-204ENST00000465425 PNPLA8Q9NP80 782 aa19.04■□□□□ 0.64
SYNE4-204ENST00000465425 SAR1AQ9NR31 198 aa19.04■□□□□ 0.64
SYNE4-204ENST00000465425 ETNK2Q9NVF9 386 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms