RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 ATXN3LQ9H3M9 355 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 C8orf33Q9H7E9 229 aaPredicted RBP18.43■□□□□ 0.54
CPSF4-209ENST00000465132 ZNHIT6Q9NWK9 470 aaKnown RBP18.43■□□□□ 0.54
CPSF4-209ENST00000465132 GMEB2Q9UKD1 530 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 GTF3C4Q9UKN8 822 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 CAPN11Q9UMQ6 739 aa18.43■□□□□ 0.54
CPSF4-209ENST00000465132 BZW2Q9Y6E2 419 aaKnown RBP18.43■□□□□ 0.54
CPSF4-209ENST00000465132 PRR5-ARHGAP8B1AHC4 643 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 FOXN3O00409 490 aaPredicted RBP18.42■□□□□ 0.54
CPSF4-209ENST00000465132 GABRR2P28476 465 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 GNA15P30679 374 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 MAGEA11P43364 429 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 KLK7P49862 253 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 PDE6CP51160 858 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 SNX16P57768 344 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 ARHGAP8P85298 464 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 LRRC32Q14392 662 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 ARHGAP29Q52LW3 1261 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 MDH1BQ5I0G3 518 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 GPR158Q5T848 1215 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 SFMBT2Q5VUG0 894 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 ARHGAP17Q68EM7 881 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 DPY19L2P1Q6NXN4 242 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 GJB7Q6PEY0 223 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 ZNF677Q86XU0 584 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 CELF5Q8N6W0 485 aaKnown RBP18.42■□□□□ 0.54
CPSF4-209ENST00000465132 SLC4A11Q8NBS3 891 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 ELMO3Q96BJ8 720 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 CYFIP2Q96F07 1278 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 PDCL3Q9H2J4 239 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 PARD6AQ9NPB6 346 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 OBP2AQ9NY56 170 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 RAB23Q9ULC3 237 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 CEP83Q9Y592 693 aa18.42■□□□□ 0.54
CPSF4-209ENST00000465132 MYBPHLA2RUH7 354 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 SPECC1L-ADORA2AF8WAN1 911 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 DPYSL4O14531 572 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 TRIM66O15016 1216 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 ADCY5O95622 1261 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 ANXA13P27216 316 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 WEE1P30291 646 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 KRT9P35527 623 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 ZNF132P52740 706 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 ATXN1P54253 815 aaKnown RBP18.41■□□□□ 0.54
CPSF4-209ENST00000465132 JAM2P57087 298 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 PSMC1P62191 440 aaKnown RBP18.41■□□□□ 0.54
CPSF4-209ENST00000465132 VEPH1Q14D04 833 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 ARHGAP15Q53QZ3 475 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 TXNDC11Q6PKC3 985 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 VPS36Q86VN1 386 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 RALGPS2Q86X27 583 aaPredicted RBP18.41■□□□□ 0.54
CPSF4-209ENST00000465132 WHAMMQ8TF30 809 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 KAT5Q92993 513 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 SMARCD1Q96GM5 515 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 ZFYVE19Q96K21 471 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 SEPT5Q99719 369 aaPredicted RBP18.41■□□□□ 0.54
CPSF4-209ENST00000465132 HNRNPABQ99729 332 aaKnown RBP18.41■□□□□ 0.54
CPSF4-209ENST00000465132 LPIN3Q9BQK8 851 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 RBM12Q9NTZ6 932 aaKnown RBP18.41■□□□□ 0.54
CPSF4-209ENST00000465132 IMPACTQ9P2X3 320 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 USP18Q9UMW8 372 aa18.41■□□□□ 0.54
CPSF4-209ENST00000465132 PRAMEF12O95522 483 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 FAM200BP0CF97 657 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 ATF6P18850 670 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 CTHP32929 405 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 CDR1P51861 262 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 CNGA2Q16280 664 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 LPAL2Q16609 132 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 MGAT5BQ3V5L5 792 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 DGKKQ5KSL6 1271 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 LAIR1Q6GTX8 287 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 PPP1R2P3Q6NXS1 205 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 TMC6Q7Z403 805 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 TTC8Q8TAM2 541 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 MYLPFQ96A32 169 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 PCED1BQ96HM7 432 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 TASP1Q9H6P5 420 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 IL21Q9HBE4 155 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 CRTAC1Q9NQ79 661 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 ABI2Q9NYB9 513 aaPredicted RBP18.4■□□□□ 0.54
CPSF4-209ENST00000465132 GTSE1Q9NYZ3 720 aa18.4■□□□□ 0.54
CPSF4-209ENST00000465132 CDV3Q9UKY7 258 aaKnown RBP18.4■□□□□ 0.54
CPSF4-209ENST00000465132 THAP12O43422 761 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 PAPSS2O95340 614 aaPredicted RBP18.39■□□□□ 0.53
CPSF4-209ENST00000465132 CDC25CP30307 473 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 CYP4F8P98187 520 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 APBA1Q02410 837 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 DMWDQ09019 674 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 ASIC2Q16515 512 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 PRR23BQ6ZRT6 265 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 Q6ZS52 159 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 OR8K1Q8NGG5 319 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 BPIFB1Q8TDL5 484 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 CPLX3Q8WVH0 158 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 NOX5Q96PH1 765 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 PKMYT1Q99640 499 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 TTYH3Q9C0H2 523 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 DPEP3Q9H4B8 488 aa18.39■□□□□ 0.53
CPSF4-209ENST00000465132 DMAP1Q9NPF5 467 aaPredicted RBP18.39■□□□□ 0.53
CPSF4-209ENST00000465132 AIPL1Q9NZN9 384 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms