RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 PDLIM7Q9NR12 457 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 HERC5Q9UII4 1024 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 PCDHGB4Q9UN71 923 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 CNTN6Q9UQ52 1028 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 HBS1LQ9Y450 684 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 PCDHGB5Q9Y5G0 923 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 CNTNAP2Q9UHC6 1331 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 HMX2A2RU54 273 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 NPM3O75607 178 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 CSH1P0DML2 217 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 CSH2P0DML3 217 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 CD19P15391 556 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 CD1EP15812 388 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 TCHHL1Q5QJ38 904 aaPredicted RBP13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 MARK2Q7KZI7 788 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 PDSS2Q86YH6 399 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 CRLF3Q8IUI8 442 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 UNC5BQ8IZJ1 945 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 WNK4Q96J92 1243 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 ZNF778Q96MU6 729 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 WWP1Q9H0M0 922 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 CYP26B1Q9NR63 512 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 POLIQ9UNA4 740 aa13.09□□□□□ -0.31
CLCNKA-204ENST00000464764 F5H423 210 aaPredicted RBP13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 PROCP04070 461 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 SNRPAP09012 282 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 RAP1GAPP47736 663 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 INHBCP55103 352 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 KRT76Q01546 638 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 PRKCEQ02156 737 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 FAM172AQ8WUF8 416 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 C7orf26Q96N11 449 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 IMPG2Q9BZV3 1241 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 ZC3H7BQ9UGR2 993 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 E2F8A0AVK6 867 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 H7C0C1 242 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 KLF11O14901 512 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 MCF2LO15068 1137 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 MIPP30301 263 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 ATP5OP48047 213 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 PSMC1P62191 440 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 YWHAZP63104 245 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 DYNC1I2Q13409 638 aaKnown RBP13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 CCNIQ14094 377 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 LRRC23Q53EV4 343 aaPredicted RBP13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 VWA5B1Q5TIE3 1220 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 DPY19L2Q6NUT2 758 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 DHDDSQ86SQ9 333 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 GDPD5Q8WTR4 605 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 PXMP2Q9NR77 195 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 SIRPGQ9P1W8 387 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 RIPK3Q9Y572 518 aa13.08□□□□□ -0.32
CLCNKA-204ENST00000464764 K7ERI5 159 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 DGAT1O75907 488 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 VCLP18206 1134 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 KCNA4P22459 653 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 TBXAS1P24557 533 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 HIC1Q14526 733 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 KCNJ11Q14654 390 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 TMCO4Q5TGY1 634 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 FAM91A1Q658Y4 838 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 MPP5Q8N3R9 675 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 FAM81AQ8TBF8 368 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 CPXM1Q96SM3 734 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 CENPKQ9BS16 269 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 LMCD1Q9NZU5 365 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 PPME1Q9Y570 386 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 SLX4Q8IY92 1834 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 SDR42E2A6NKP2 422 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 APRTP07741 180 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 SFNP31947 248 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 CDH8P55286 799 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 RPL10AP62906 217 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 LSAMPQ13449 338 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 MED21Q13503 144 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 BAATQ14032 418 aaPredicted RBP13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 DNAL1Q4LDG9 190 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 EFHC1Q5JVL4 640 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 ATG16L1Q676U5 607 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 FBXL19Q6PCT2 694 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 HPS6Q86YV9 775 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 ADGRF2Q8IZF7 708 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 NAT14Q8WUY8 206 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 NCSTNQ92542 709 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 OPTNQ96CV9 577 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 PEBP4Q96S96 227 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 CGRRF1Q99675 332 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 NXF1Q9UBU9 619 aaKnown RBP13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 SOX13Q9UN79 622 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 DNAJC16Q9Y2G8 782 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 HEY1Q9Y5J3 304 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 NR2E3Q9Y5X4 410 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 MAD1L1Q9Y6D9 718 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 MYOCOSA0A1B0GUC4 107 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 YDJCA8MPS7 323 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 KRT37O76014 449 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 GRIA1P42261 906 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 STX3Q13277 289 aa13.07□□□□□ -0.32
CLCNKA-204ENST00000464764 TRIP10Q15642 601 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms