RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 Q6ZNX1 250 aa4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 CAND1Q86VP6 1230 aaKnown RBP4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 NRSN1Q8IZ57 195 aa4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 GALNT15Q8N3T1 639 aa4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 SLC44A3Q8N4M1 653 aa4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 XAGE5Q8WWM1 108 aa4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 R3HDM4Q96D70 268 aa4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 RSPRY1Q96DX4 576 aa4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 COQ10AQ96MF6 247 aa4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 NUDT22Q9BRQ3 303 aa4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 DPCDQ9BVM2 203 aaPredicted RBP4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 MMRN2Q9H8L6 949 aa4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 CYP4F11Q9HBI6 524 aa4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 NKX1-2Q9UD57 310 aaPredicted RBP4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 HERC5Q9UII4 1024 aaKnown RBP4.28□□□□□ -1.72
HMGXB4-205ENST00000464480 COL15A1P39059 1388 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 WDR27A2RRH5 827 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 J3KTA2 159 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 M0R3H8 397 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 AGPSO00116 658 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 EXOC5O00471 708 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 IRAK2O43187 625 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 URI1O94763 535 aaPredicted RBP4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 USP1O94782 785 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 WDR47O94967 919 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 PRKCBP05771 671 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 FESP07332 822 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 ADH4P08319 380 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 IL6RP08887 468 aaPredicted RBP4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 DLDP09622 509 aaKnown RBP4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 HSD3B1P14060 373 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 ZFXP17010 805 aaPredicted RBP4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 YY1P25490 414 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 RENBPP51606 427 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 SUMO2P61956 95 aaKnown RBP4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 TAP1Q03518 808 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 MPP3Q13368 585 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 CSHL1Q14406 222 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 POSTNQ15063 836 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 LY6KQ17RY6 165 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 ATPAF1Q5TC12 328 aaPredicted RBP4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 FNDC7Q5VTL7 733 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 CCDC117Q8IWD4 279 aaPredicted RBP4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 LRRC71Q8N4P6 559 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 SUPT20HQ8NEM7 779 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 SUN3Q8TAQ9 357 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 WDR60Q8WVS4 1066 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 CAVIN3Q969G5 261 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 GCC1Q96CN9 775 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 WDR24Q96S15 920 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 RTKNQ9BST9 563 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 TP63Q9H3D4 680 aaPredicted RBP4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 LRIT1Q9P2V4 623 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 CCNL1Q9UK58 526 aaPredicted RBP4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 SLC27A6Q9Y2P4 619 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 PCDHGB3Q9Y5G1 929 aa4.27□□□□□ -1.73
HMGXB4-205ENST00000464480 MAST3O60307 1309 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 PNMA6EA0A0J9YXQ4 647 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 CCDC151A5D8V7 595 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 A8MVJ9 347 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 KIAA0355O15063 1070 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 DNPH1O43598 174 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 ACTL6BO94805 426 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 ZNF202O95125 648 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 VNN1O95497 513 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 ANXA6P08133 673 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 DHRS4L1P0CG22 281 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 TMEM225BP0DP42 221 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 TGM1P22735 817 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 AKT1P31749 480 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 GKP32189 559 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 MCM7P33993 719 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 HTR7P34969 479 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 PDE1AP54750 535 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 EIF4A1P60842 406 aaKnown RBP4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 AP2B1P63010 937 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 MRPS35P82673 323 aaKnown RBP4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 PPFIA1Q13136 1202 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 TIGD6Q17RP2 521 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 ZXDCQ2QGD7 858 aaPredicted RBP4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 KAZNQ674X7 775 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 DENND2CQ68D51 928 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 KIAA0895LQ68EN5 471 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 SULT6B1Q6IMI4 303 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 LIN54Q6MZP7 749 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 RINT1Q6NUQ1 792 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 ZNF551Q7Z340 670 aaPredicted RBP4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 ANKRD18AQ8IVF6 992 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 C11orf44Q8N8P7 122 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 NGDNQ8NEJ9 315 aaKnown RBP4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 STT3BQ8TCJ2 826 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 ACTRT2Q8TDY3 377 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 TFAP2BQ92481 460 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 RUBCNQ92622 972 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 RSC1A1Q92681 617 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 VPS50Q96JG6 964 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 HAPLN3Q96S86 360 aa4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 EIF3CQ99613 913 aaKnown RBP4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 SORBS1Q9BX66 1292 aaKnown RBP4.26□□□□□ -1.73
HMGXB4-205ENST00000464480 EPS8L2Q9H6S3 715 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms