RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 LCLAT1Q6UWP7 414 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 FAM83CQ9BQN1 747 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 NACA2Q9H009 215 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 EBF3Q9H4W6 596 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 ACP6Q9NPH0 428 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 PLCB1Q9NQ66 1216 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 OSER1Q9NX31 292 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 AJAP1Q9UKB5 411 aaPredicted RBP17.94■□□□□ 0.46
VPS52-215ENST00000464425 CNTN6Q9UQ52 1028 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 SIT1Q9Y3P8 196 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 MTF2Q9Y483 593 aaPredicted RBP17.94■□□□□ 0.46
VPS52-215ENST00000464425 USP3Q9Y6I4 520 aa17.94■□□□□ 0.46
VPS52-215ENST00000464425 F5P12259 2224 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 M0QYV0 167 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 SCAMP3O14828 347 aaKnown RBP17.93■□□□□ 0.46
VPS52-215ENST00000464425 OLFM2O95897 454 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 TBX18O95935 607 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 DCNP07585 359 aaKnown RBP17.93■□□□□ 0.46
VPS52-215ENST00000464425 ARSAP15289 507 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 TKTL1P51854 596 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 UBASH3AP57075 661 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 UBXN2BQ14CS0 331 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 ZNF852Q6ZMS4 543 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 SECISBP2LQ93073 1101 aaKnown RBP17.93■□□□□ 0.46
VPS52-215ENST00000464425 DDX23Q9BUQ8 820 aaKnown RBP17.93■□□□□ 0.46
VPS52-215ENST00000464425 LSM14BQ9BX40 385 aaKnown RBP17.93■□□□□ 0.46
VPS52-215ENST00000464425 NMUR1Q9HB89 426 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 LRRC4Q9HBW1 653 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 DUS2Q9NX74 493 aaKnown RBP17.93■□□□□ 0.46
VPS52-215ENST00000464425 NAGPAQ9UK23 515 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 NUDT5Q9UKK9 219 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.93■□□□□ 0.46
VPS52-215ENST00000464425 SIK3Q9Y2K2 1263 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 DAAM1Q9Y4D1 1078 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 WNT6Q9Y6F9 365 aa17.93■□□□□ 0.46
VPS52-215ENST00000464425 ZNF318Q5VUA4 2279 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 A0A1W2PQC6 194 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 SHISA7A6NL88 538 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 FAM170BA6NMN3 283 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 TEX33O43247 280 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 TLR5O60602 858 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 SETSIPP0DME0 302 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 RGS7P49802 495 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 TUBP50607 506 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 USP4Q13107 963 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 STILQ15468 1287 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 PKDCCQ504Y2 493 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 RAB41Q5JT25 222 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 KLHDC7AQ5VTJ3 777 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 CCDC186Q7Z3E2 898 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 SCD5Q86SK9 330 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 PJA1Q8NG27 643 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 OSCP1Q8WVF1 389 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 NDRG1Q92597 394 aaKnown RBP17.92■□□□□ 0.46
VPS52-215ENST00000464425 ULBP1Q9BZM6 244 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 LINC00597Q9H2U6 94 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 HPS4Q9NQG7 708 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 CFAP97Q9P2B7 532 aa17.92■□□□□ 0.46
VPS52-215ENST00000464425 NDRG2Q9UN36 371 aaKnown RBP17.92■□□□□ 0.46
VPS52-215ENST00000464425 OTOL1A6NHN0 477 aaPredicted RBP17.91■□□□□ 0.46
VPS52-215ENST00000464425 PIK3R2O00459 728 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 MAN2B1O00754 1011 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 THAP12O43422 761 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 PNMA6AP0CW24 399 aaPredicted RBP17.91■□□□□ 0.46
VPS52-215ENST00000464425 RARGP13631 454 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 LCP1P13796 627 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 PLA2G4AP47712 749 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 IFNAR2P48551 515 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 ADIGQ0VDE8 80 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 RUNX3Q13761 415 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 PDGFRLQ15198 375 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 SYCP1Q15431 976 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 ITPRIPL2Q3MIP1 535 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 PMF1Q6P1K2 205 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 SLC35F5Q8WV83 523 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 FAM3CQ92520 227 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 SHC3Q92529 594 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 C8orf33Q9H7E9 229 aaPredicted RBP17.91■□□□□ 0.46
VPS52-215ENST00000464425 LTB4R2Q9NPC1 389 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 TICRRQ7Z2Z1 1910 aa17.91■□□□□ 0.46
VPS52-215ENST00000464425 SPECC1L-ADORA2AF8WAN1 911 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 FOXN3O00409 490 aaPredicted RBP17.9■□□□□ 0.46
VPS52-215ENST00000464425 MDM4O15151 490 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 CBFA2T2O43439 604 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 ZBED1O96006 694 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 TPM3P06753 285 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 IRF1P10914 325 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 GLULP15104 373 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 TCF3P15923 654 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 TARSP26639 723 aaKnown RBP17.9■□□□□ 0.46
VPS52-215ENST00000464425 GNA15P30679 374 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 ATP5C1P36542 298 aaKnown RBP17.9■□□□□ 0.46
VPS52-215ENST00000464425 KLK7P49862 253 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 RAPGEF1Q13905 1077 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 C10orf120Q5SQS8 335 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 DENND1BQ6P3S1 775 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 SARM1Q6SZW1 724 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 CCDC105Q8IYK2 499 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 SIX6OS1Q8N1H7 587 aa17.9■□□□□ 0.46
VPS52-215ENST00000464425 ZNF606Q8WXB4 792 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms