RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 DDX43Q9NXZ2 648 aaKnown RBP22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 CACNG4Q9UBN1 327 aa22.7■■□□□ 1.22
PDLIM2-216ENST00000464275 GMNCA6NCL1 334 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 SGK1O00141 431 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 CAND2O75155 1236 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 PIGZQ86VD9 579 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 VSIG1Q86XK7 387 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 GLIS1Q8NBF1 620 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 CENPIQ92674 756 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 TMEM121Q9BTD3 319 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 C11orf84Q9BUA3 381 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 UBN1Q9NPG3 1134 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 BCCIPQ9P287 314 aaKnown RBP eCLIP22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 MOXD2PA6NHM9 499 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 MDM4O15151 490 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 TRAPPC3O43617 180 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 TRPA1O75762 1119 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 NPR3P17342 541 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 IGFBP6P24592 240 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 KCTD13Q8WZ19 329 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 ADAM2Q99965 735 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 MED10Q9BTT4 135 aa22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 DDX23Q9BUQ8 820 aaKnown RBP22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 STMN4Q9H169 189 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 TPX2Q9ULW0 747 aaKnown RBP22.69■■□□□ 1.22
PDLIM2-216ENST00000464275 E7EVH7 732 aa22.68■■□□□ 1.22
PDLIM2-216ENST00000464275 HDAC4P56524 1084 aa22.68■■□□□ 1.22
PDLIM2-216ENST00000464275 GPS1Q13098 491 aa22.68■■□□□ 1.22
PDLIM2-216ENST00000464275 UPP1Q16831 310 aa22.68■■□□□ 1.22
PDLIM2-216ENST00000464275 MDH1BQ5I0G3 518 aa22.68■■□□□ 1.22
PDLIM2-216ENST00000464275 PAQR9Q6ZVX9 377 aa22.68■■□□□ 1.22
PDLIM2-216ENST00000464275 OTUD6BQ8N6M0 293 aa22.68■■□□□ 1.22
PDLIM2-216ENST00000464275 RNF157Q96PX1 679 aa22.68■■□□□ 1.22
PDLIM2-216ENST00000464275 SYT15Q9BQS2 421 aa22.68■■□□□ 1.22
PDLIM2-216ENST00000464275 TSEN34Q9BSV6 310 aaKnown RBP22.68■■□□□ 1.22
PDLIM2-216ENST00000464275 ADAM7Q9H2U9 754 aa22.68■■□□□ 1.22
PDLIM2-216ENST00000464275 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.68■■□□□ 1.22
PDLIM2-216ENST00000464275 SAE1Q9UBE0 346 aaPredicted RBP22.68■■□□□ 1.22
PDLIM2-216ENST00000464275 CASTOR2A6NHX0 329 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 CLDN5O00501 218 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 GNRH1P01148 92 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 ZSCAN5DPP0CG00 497 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 ETS1P14921 441 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 MMRN1Q13201 1228 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 SKIDA1Q1XH10 827 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 KIAA0319Q5VV43 1072 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 RELL1Q8IUW5 271 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 ZCCHC9Q8N567 271 aaKnown RBP22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 RNF169Q8NCN4 708 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 C3orf58Q8NDZ4 430 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 GLT1D1Q96MS3 346 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 SNRNP25Q9BV90 132 aaKnown RBP22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 CRTAC1Q9NQ79 661 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 NOVA2Q9UNW9 492 aaKnown RBP22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 ZNF487B1APH4 448 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 MCF2LO15068 1137 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 EIF3EP60228 445 aaKnown RBP22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 GRIK3Q13003 919 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 C6orf118Q5T5N4 469 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 SPATA18Q8TC71 538 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 RSAD2Q8WXG1 361 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 ROPN1BQ9BZX4 212 aaPredicted RBP22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 ROPN1Q9HAT0 212 aaPredicted RBP22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 PCDH18Q9HCL0 1135 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 CREBZFQ9NS37 354 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 CDH9Q9ULB4 789 aa22.67■■□□□ 1.22
PDLIM2-216ENST00000464275 ZNF638Q14966 1978 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 PTPRDP23468 1912 aa22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 C5orf60A6NFR6 353 aa22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 FSBPO95073 299 aa22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 TTC4O95801 387 aa22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 PECAM1P16284 738 aaPredicted RBP22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 PAX3P23760 479 aa22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 ADIGQ0VDE8 80 aa22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 MORF4L2Q15014 288 aa22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 UBAP2Q5T6F2 1119 aaKnown RBP22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 ERMARDQ5T6L9 678 aa22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 CLEC20AQ6ZU45 233 aa22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 PCGF5Q86SE9 256 aa22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 MICALL1Q8N3F8 863 aa22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 LRRC4CQ9HCJ2 640 aa22.66■■□□□ 1.22
PDLIM2-216ENST00000464275 IFNB1P01574 187 aa22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 FAM200BP0CF97 657 aa22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 MAGOHP61326 146 aaKnown RBP22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 NOMO1Q15155 1222 aa22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 CCDC142Q17RM4 750 aa22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 ZC3H12AQ5D1E8 599 aaKnown RBP22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 STRADAQ7RTN6 431 aa22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 P3H4Q92791 437 aa22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 LRRC4Q9HBW1 653 aa22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 GPATCH2LQ9NWQ4 482 aa22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 DAB1O75553 588 aa22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 TFE3P19532 575 aaPredicted RBP22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 MATKP42679 507 aa22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 MRPS5P82675 430 aaKnown RBP22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 ADCY1Q08828 1119 aa22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 TIGD5Q53EQ6 642 aa22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 ECHDC2Q86YB7 292 aa22.65■■□□□ 1.22
PDLIM2-216ENST00000464275 UROC1Q96N76 676 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms