RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 ATXN2Q99700 1313 aaKnown RBP18.35■□□□□ 0.53
HMGN1-210ENST00000464078 A8MXQ7 604 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 TGFB1I1O43294 461 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 ZDHHC11BP0C7U3 371 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 ITPKAP23677 461 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 ATICP31939 592 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 HECTD3Q5T447 861 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 NUDT18Q6ZVK8 323 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 PDILTQ8N807 584 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 ZNF513Q8N8E2 541 aaPredicted RBP18.35■□□□□ 0.53
HMGN1-210ENST00000464078 TERB1Q8NA31 727 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 ZCCHC14Q8WYQ9 949 aaKnown RBP18.35■□□□□ 0.53
HMGN1-210ENST00000464078 VRTNQ9H8Y1 702 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 CAPN10Q9HC96 672 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 DMAP1Q9NPF5 467 aaPredicted RBP18.35■□□□□ 0.53
HMGN1-210ENST00000464078 ZDHHC4Q9NPG8 344 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 DEC1Q9P2X7 70 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 SLC6A14Q9UN76 642 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 MSRB2Q9Y3D2 182 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 STARD13Q9Y3M8 1113 aa18.35■□□□□ 0.53
HMGN1-210ENST00000464078 TBC1D3BA6NDS4 549 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 SRRM3A6NNA2 597 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-210ENST00000464078 SERPINF2P08697 491 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 GABRG2P18507 467 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 SYT1P21579 422 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 NASPP49321 788 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-210ENST00000464078 IFRD2Q12894 506 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-210ENST00000464078 DUOXA1Q1HG43 343 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 FAM26FQ5R3K3 315 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 BTBD8Q5XKL5 378 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 SLC36A4Q6YBV0 504 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 FAM35AQ86V20 835 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 BBS7Q8IWZ6 715 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 XXYLT1Q8NBI6 393 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 SYAP1Q96A49 352 aaPredicted RBP18.34■□□□□ 0.53
HMGN1-210ENST00000464078 CCDC127Q96BQ5 260 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 CD248Q9HCU0 757 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 SPHK2Q9NRA0 654 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 COMMD8Q9NX08 183 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 CALCOCO1Q9P1Z2 691 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 SH3BP1Q9Y3L3 701 aa18.34■□□□□ 0.53
HMGN1-210ENST00000464078 ADAMTS9Q9P2N4 1935 aa18.33■□□□□ 0.53
HMGN1-210ENST00000464078 CLDN5O00501 218 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 HYAL3O43820 417 aaPredicted RBP18.33■□□□□ 0.52
HMGN1-210ENST00000464078 CFIP05156 583 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 HOXB2P14652 356 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 NTSR1P30989 418 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 SLC5A3P53794 718 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 MYL6P60660 151 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 SIM1P81133 766 aaPredicted RBP18.33■□□□□ 0.52
HMGN1-210ENST00000464078 RPL6Q02878 288 aaKnown RBP18.33■□□□□ 0.52
HMGN1-210ENST00000464078 GFPT1Q06210 699 aaPredicted RBP18.33■□□□□ 0.52
HMGN1-210ENST00000464078 EHHADHQ08426 723 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 C10orf76Q5T2E6 689 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 C12orf56Q8IXR9 622 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 PGBD3Q8N328 593 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 SMARCD1Q96GM5 515 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 KCNK16Q96T55 309 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 CCSER2Q9H7U1 834 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 HCN2Q9UL51 889 aa18.33■□□□□ 0.52
HMGN1-210ENST00000464078 A0A1W2PQF6 199 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 FAM221BA6H8Z2 402 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 H0Y626 953 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 TRIM16O95361 564 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 ASIC1P78348 528 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 AMPD3Q01432 767 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 TRPC3Q13507 836 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 KIAA1211LQ6NV74 962 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 PAQR9Q6ZVX9 377 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 RDH13Q8NBN7 331 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 SCAMP5Q8TAC9 235 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 ZNF516Q92618 1163 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 TNIP3Q96KP6 325 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 SMYD3Q9H7B4 428 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 CGNQ9P2M7 1197 aaKnown RBP18.32■□□□□ 0.52
HMGN1-210ENST00000464078 NXF1Q9UBU9 619 aaKnown RBP18.32■□□□□ 0.52
HMGN1-210ENST00000464078 KLK13Q9UKR3 277 aa18.32■□□□□ 0.52
HMGN1-210ENST00000464078 IGHV1OR15-9A0A0B4J2B8 117 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 SPAARA0A1B0GVQ0 90 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 CACNG3O60359 315 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 GREM1O60565 184 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 OPHN1O60890 802 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 ZNF217O75362 1048 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 CYP2J2P51589 502 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 ATXN3P54252 364 aaPredicted RBP18.31■□□□□ 0.52
HMGN1-210ENST00000464078 ZNF33AQ06730 810 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 HNRNPDQ14103 355 aaKnown RBP18.31■□□□□ 0.52
HMGN1-210ENST00000464078 BMT2Q1RMZ1 405 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 ANO4Q32M45 955 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 TMEM25Q86YD3 366 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 MIB1Q86YT6 1006 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 HDDC3Q8N4P3 179 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 NAT16Q8N8M0 369 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 SCFD1Q8WVM8 642 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 GABRG3Q99928 467 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 MARK1Q9P0L2 795 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 GMIPQ9P107 970 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 CHORDC1Q9UHD1 332 aaPredicted RBP18.31■□□□□ 0.52
HMGN1-210ENST00000464078 MTMR6Q9Y217 621 aa18.31■□□□□ 0.52
HMGN1-210ENST00000464078 IGSF10Q6WRI0 2623 aa18.31■□□□□ 0.52
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