RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 NACA2Q9H009 215 aa19.93■□□□□ 0.78
SF3A1-205ENST00000463818 TLR8Q9NR97 1041 aaKnown RBP19.93■□□□□ 0.78
SF3A1-205ENST00000463818 RMND1Q9NWS8 449 aa19.93■□□□□ 0.78
SF3A1-205ENST00000463818 CDV3Q9UKY7 258 aaKnown RBP19.93■□□□□ 0.78
SF3A1-205ENST00000463818 DCHS1Q96JQ0 3298 aa19.93■□□□□ 0.78
SF3A1-205ENST00000463818 MED19A0JLT2 244 aaPredicted RBP19.92■□□□□ 0.78
SF3A1-205ENST00000463818 HHLA1C9JL84 531 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 TLR5O60602 858 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 APBB3O95704 486 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 TBX18O95935 607 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 ADH5P11766 374 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 MESP2Q0VG99 397 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 GPRIN1Q7Z2K8 1008 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 C12orf40Q86WS4 652 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 CCDC33Q8N5R6 958 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 OTUB2Q96DC9 234 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 LOXL4Q96JB6 756 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 ARRDC1-AS1Q9H2J1 176 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 EBF1Q9UH73 591 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 SCML2Q9UQR0 700 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 DMXL1Q9Y485 3027 aa19.92■□□□□ 0.78
SF3A1-205ENST00000463818 SDK1Q7Z5N4 2213 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 A0A0A0MRY4 1105 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 STX10O60499 249 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 KAT7O95251 611 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 EPB41P11171 864 aaKnown RBP19.91■□□□□ 0.78
SF3A1-205ENST00000463818 ACO1P21399 889 aaKnown RBP19.91■□□□□ 0.78
SF3A1-205ENST00000463818 EIF2DP41214 584 aaKnown RBP19.91■□□□□ 0.78
SF3A1-205ENST00000463818 NUCB2P80303 420 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 GAD2Q05329 585 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 ZNF394Q53GI3 561 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 PRR23CQ6ZRP0 262 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 SFTPA1Q8IWL2 248 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 BBS7Q8IWZ6 715 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 ENGASEQ8NFI3 743 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 HEXIM2Q96MH2 286 aaKnown RBP19.91■□□□□ 0.78
SF3A1-205ENST00000463818 GSDMAQ96QA5 445 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 RTKNQ9BST9 563 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 DNAI2Q9GZS0 605 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 RAB20Q9NX57 234 aa19.91■□□□□ 0.78
SF3A1-205ENST00000463818 DCLK1O15075 740 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 APODP05090 189 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 IRF1P10914 325 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 ATP5C1P36542 298 aaKnown RBP19.9■□□□□ 0.78
SF3A1-205ENST00000463818 GRIA2P42262 883 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 MXI1P50539 228 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 DGKEP52429 567 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 MRPS21P82921 87 aaKnown RBP19.9■□□□□ 0.78
SF3A1-205ENST00000463818 PLK5Q496M5 336 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 PPP1R26Q5T8A7 1209 aaPredicted RBP19.9■□□□□ 0.78
SF3A1-205ENST00000463818 ZNF658Q5TYW1 1059 aaPredicted RBP19.9■□□□□ 0.78
SF3A1-205ENST00000463818 EMC10Q5UCC4 262 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 NAT16Q8N8M0 369 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 FBXL13Q8NEE6 735 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 TSTD1Q8NFU3 115 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 ERCC4Q92889 916 aaPredicted RBP19.9■□□□□ 0.78
SF3A1-205ENST00000463818 ZC3H10Q96K80 434 aaKnown RBP19.9■□□□□ 0.78
SF3A1-205ENST00000463818 KLF16Q9BXK1 252 aaPredicted RBP19.9■□□□□ 0.78
SF3A1-205ENST00000463818 DUSP16Q9BY84 665 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 ARHGEF4Q9NR80 690 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 SPHK2Q9NRA0 654 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 OSER1Q9NX31 292 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 MMP17Q9ULZ9 603 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 PCDHA5Q9Y5H7 936 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 CACNA1AO00555 2505 aa19.9■□□□□ 0.78
SF3A1-205ENST00000463818 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.89■□□□□ 0.77
SF3A1-205ENST00000463818 DCDC2BA2VCK2 349 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 CYP26A1O43174 497 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 GDF9O60383 454 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 EPN2O95208 641 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 SMC2O95347 1197 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 KIF11P52732 1056 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 CCDC6Q16204 474 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 COBLL1Q53SF7 1204 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 BTBD8Q5XKL5 378 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 ANKRD40Q6AI12 368 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 HTR3DQ70Z44 454 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 TMEM25Q86YD3 366 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 NETO1Q8TDF5 533 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 TATDN2Q93075 761 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 FAXDC2Q96IV6 333 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 TSG101Q99816 390 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 DUSP9Q99956 384 aaKnown RBP19.89■□□□□ 0.77
SF3A1-205ENST00000463818 NMUR1Q9HB89 426 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 PNPLA8Q9NP80 782 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 CYLDQ9NQC7 956 aa19.89■□□□□ 0.77
SF3A1-205ENST00000463818 A0A1W2PQH9 124 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.88■□□□□ 0.77
SF3A1-205ENST00000463818 FOXD2O60548 495 aaPredicted RBP19.88■□□□□ 0.77
SF3A1-205ENST00000463818 GREM1O60565 184 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 RARGP13631 454 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 TIE1P35590 1138 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 TNFRSF4P43489 277 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 FKBP3Q00688 224 aaKnown RBP19.88■□□□□ 0.77
SF3A1-205ENST00000463818 KDSRQ06136 332 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 CRY1Q16526 586 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 TTC39CQ8N584 583 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 ALLCQ8N6M5 410 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 SPATA20Q8TB22 786 aa19.88■□□□□ 0.77
SF3A1-205ENST00000463818 SMARCE1Q969G3 411 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms