RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 KIAA0391O15091 583 aaKnown RBP15.38■□□□□ 0.05
SMC1A-204ENST00000463684 COCHO43405 550 aa15.38■□□□□ 0.05
SMC1A-204ENST00000463684 GJB3O75712 270 aa15.38■□□□□ 0.05
SMC1A-204ENST00000463684 PTPN1P18031 435 aaKnown RBP15.38■□□□□ 0.05
SMC1A-204ENST00000463684 NDUFV2P19404 249 aa15.38■□□□□ 0.05
SMC1A-204ENST00000463684 HECTD3Q5T447 861 aa15.38■□□□□ 0.05
SMC1A-204ENST00000463684 GRAMD4Q6IC98 578 aa15.38■□□□□ 0.05
SMC1A-204ENST00000463684 TMEM25Q86YD3 366 aa15.38■□□□□ 0.05
SMC1A-204ENST00000463684 BBS7Q8IWZ6 715 aa15.38■□□□□ 0.05
SMC1A-204ENST00000463684 OR5B17Q8NGF7 314 aa15.38■□□□□ 0.05
SMC1A-204ENST00000463684 IPO4Q8TEX9 1081 aaKnown RBP15.38■□□□□ 0.05
SMC1A-204ENST00000463684 FBXO32Q969P5 355 aa15.38■□□□□ 0.05
SMC1A-204ENST00000463684 OLFML3Q9NRN5 406 aa15.38■□□□□ 0.05
SMC1A-204ENST00000463684 CHORDC1Q9UHD1 332 aaPredicted RBP15.38■□□□□ 0.05
SMC1A-204ENST00000463684 ANAPC1Q9H1A4 1944 aa15.38■□□□□ 0.05
SMC1A-204ENST00000463684 TNRC6BQ9UPQ9 1833 aaKnown RBP15.38■□□□□ 0.05
SMC1A-204ENST00000463684 PTPRDP23468 1912 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 TACC1O75410 805 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 FAM163BP0C2L3 166 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 IDEP14735 1019 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 GJB2P29033 226 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 CASP5P51878 434 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 CACNA2D1P54289 1103 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 RRAGBQ5VZM2 374 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 TOGARAM2Q6ZUX3 1019 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 MIB1Q86YT6 1006 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 MDM1Q8TC05 714 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 SCFD1Q8WVM8 642 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 DNAJC19Q96DA6 116 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 ERLEC1Q96DZ1 483 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 EPSTI1Q96J88 318 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 ZFRQ96KR1 1074 aaKnown RBP15.37■□□□□ 0.05
SMC1A-204ENST00000463684 XPO6Q96QU8 1125 aaKnown RBP15.37■□□□□ 0.05
SMC1A-204ENST00000463684 MRPL45Q9BRJ2 306 aaKnown RBP15.37■□□□□ 0.05
SMC1A-204ENST00000463684 NACA2Q9H009 215 aa15.37■□□□□ 0.05
SMC1A-204ENST00000463684 DNAJC17Q9NVM6 304 aaKnown RBP15.37■□□□□ 0.05
SMC1A-204ENST00000463684 MAOBP27338 520 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 TNNC1P63316 161 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 GRIK2Q13002 908 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 SF3A1Q15459 793 aaKnown RBP15.36■□□□□ 0.05
SMC1A-204ENST00000463684 EGFLAMQ63HQ2 1017 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 GLRX5Q86SX6 157 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 SLCO6A1Q86UG4 719 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 WDR49Q8IV35 697 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 SETD7Q8WTS6 366 aaKnown RBP15.36■□□□□ 0.05
SMC1A-204ENST00000463684 LRIG1Q96JA1 1093 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 ACOX2Q99424 681 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 DUSP9Q99956 384 aaKnown RBP15.36■□□□□ 0.05
SMC1A-204ENST00000463684 ZNF518BQ9C0D4 1074 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 KIAA1522Q9P206 1035 aaPredicted RBP15.36■□□□□ 0.05
SMC1A-204ENST00000463684 HCN2Q9UL51 889 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 RAXQ9Y2V3 346 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 HELZP42694 1942 aaKnown RBP15.36■□□□□ 0.05
SMC1A-204ENST00000463684 ADAMTS20P59510 1910 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 LAMA5O15230 3695 aa15.36■□□□□ 0.05
SMC1A-204ENST00000463684 A0A1B0GTW7 788 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 MEI4A8MW99 385 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 A8MXQ7 604 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 CLDN5O00501 218 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 TRIM24O15164 1050 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 IRF1P10914 325 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 CD6P30203 668 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 TXLNAP40222 546 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 TUBP50607 506 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 SNX30Q5VWJ9 437 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 KIAA1324Q6UXG2 1013 aaKnown RBP15.35■□□□□ 0.05
SMC1A-204ENST00000463684 TRAPPC11Q7Z392 1133 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 MRGPRX1Q96LB2 322 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 KIF2CQ99661 725 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 GABRG3Q99928 467 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 B3GNT5Q9BYG0 378 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 CCSER2Q9H7U1 834 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 KIAA1586Q9HCI6 787 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 SCUBE2Q9NQ36 999 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 TMEM30AQ9NV96 361 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 PANK4Q9NVE7 773 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 WDR35Q9P2L0 1181 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 PCOLCE2Q9UKZ9 415 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 CACNA1EQ15878 2313 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 ATP8B3O60423 1300 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 PTPRJQ12913 1337 aa15.35■□□□□ 0.05
SMC1A-204ENST00000463684 NEDD8-MDP1E9PL57 170 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 GFRA2O00451 464 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 CBFA2T3O75081 653 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 CST3P01034 146 aaPredicted RBP15.34■□□□□ 0.05
SMC1A-204ENST00000463684 TNNI1P19237 187 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 WDR72Q3MJ13 1102 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 LARP1BQ659C4 914 aaKnown RBP15.34■□□□□ 0.05
SMC1A-204ENST00000463684 STXBP4Q6ZWJ1 553 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 USP49Q70CQ1 688 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 BRAPQ7Z569 592 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 CBWD2Q8IUF1 395 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 B3GALNT2Q8NCR0 500 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 SCAMP5Q8TAC9 235 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 KCNK16Q96T55 309 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 MED10Q9BTT4 135 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 BBS2Q9BXC9 721 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 SLC6A17Q9H1V8 727 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 DPEP3Q9H4B8 488 aa15.34■□□□□ 0.05
SMC1A-204ENST00000463684 CD248Q9HCU0 757 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms