RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 SPTBN2O15020 2390 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 CACNA1AO00555 2505 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 HHLA1C9JL84 531 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 K7EQS6 105 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 SLC16A3O15427 465 aaKnown RBP7.69□□□□□ -1.18
PTPRF-210ENST00000463041 FOXD2O60548 495 aaPredicted RBP7.69□□□□□ -1.18
PTPRF-210ENST00000463041 TLR5O60602 858 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 ADH1CP00326 375 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 ACO1P21399 889 aaKnown RBP7.69□□□□□ -1.18
PTPRF-210ENST00000463041 TGM1P22735 817 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 ADORA2BP29275 332 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 ATP5C1P36542 298 aaKnown RBP7.69□□□□□ -1.18
PTPRF-210ENST00000463041 OPRD1P41143 372 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 TNFRSF4P43489 277 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 PLA2G4AP47712 749 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 PSEN1P49768 467 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 MXI1P50539 228 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 KIF11P52732 1056 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 GAD2Q05329 585 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 ORC1Q13415 861 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 GAB4Q2WGN9 574 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 HSF5Q4G112 596 aaPredicted RBP7.69□□□□□ -1.18
PTPRF-210ENST00000463041 PPP1R26Q5T8A7 1209 aaPredicted RBP7.69□□□□□ -1.18
PTPRF-210ENST00000463041 TCERG1LQ5VWI1 586 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 PKN3Q6P5Z2 889 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 KLHDC10Q6PID8 442 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 FOXR2Q6PJQ5 311 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 PRR23BQ6ZRT6 265 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 CLEC20AQ6ZU45 233 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 NUDT18Q6ZVK8 323 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 HTR3DQ70Z44 454 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 CEP68Q76N32 757 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 CACNA2D4Q7Z3S7 1137 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 TADA2BQ86TJ2 420 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 RPLP0P6Q8NHW5 317 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 USP33Q8TEY7 942 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 GAB3Q8WWW8 586 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 TATDN2Q93075 761 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 RMDN1Q96DB5 314 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 EEF2KMTQ96G04 330 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 TMEM176AQ96HP8 235 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 LOXL4Q96JB6 756 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 ZFRQ96KR1 1074 aaKnown RBP7.69□□□□□ -1.18
PTPRF-210ENST00000463041 TWNKQ96RR1 684 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 PNKPQ96T60 521 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 KLF16Q9BXK1 252 aaPredicted RBP7.69□□□□□ -1.18
PTPRF-210ENST00000463041 NACA2Q9H009 215 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 CCSER2Q9H7U1 834 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 CYLDQ9NQC7 956 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 CISHQ9NSE2 258 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 FAM49BQ9NUQ9 324 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 DLL3Q9NYJ7 618 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 GMIPQ9P107 970 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 HMGXB4Q9UGU5 601 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 ARMCX3Q9UH62 379 aaPredicted RBP7.69□□□□□ -1.18
PTPRF-210ENST00000463041 EBF1Q9UH73 591 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 USP3Q9Y6I4 520 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 LAMA1P25391 3075 aa7.69□□□□□ -1.18
PTPRF-210ENST00000463041 NUP205Q92621 2012 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.68□□□□□ -1.18
PTPRF-210ENST00000463041 PSMA7O14818 248 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 AXIN1O15169 862 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 PMM2O15305 246 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 RPP40O75818 363 aaKnown RBP7.68□□□□□ -1.18
PTPRF-210ENST00000463041 APBB3O95704 486 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 APODP05090 189 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 CYP17A1P05093 508 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 ADH5P11766 374 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 RARGP13631 454 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 CD58P19256 250 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 GRIA2P42262 883 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 SLC6A11P48066 632 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 RAD23BP54727 409 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 SLC8A3P57103 927 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 YWHAEP62258 255 aaKnown RBP7.68□□□□□ -1.18
PTPRF-210ENST00000463041 LMNB2Q03252 620 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 GOLGA8FQ08AF8 430 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 GOLGA8DPQ0D2H9 430 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 SRSF5Q13243 272 aaKnown RBP7.68□□□□□ -1.18
PTPRF-210ENST00000463041 DMC1Q14565 340 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 ZNF394Q53GI3 561 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 LY6G5CQ5SRR4 150 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 BTBD8Q5XKL5 378 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 ARHGAP17Q68EM7 881 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 NAIF1Q69YI7 327 aaPredicted RBP7.68□□□□□ -1.18
PTPRF-210ENST00000463041 CCDC186Q7Z3E2 898 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 FAM160A2Q8N612 972 aaPredicted RBP7.68□□□□□ -1.18
PTPRF-210ENST00000463041 ANKRD52Q8NB46 1076 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 SLC4A11Q8NBS3 891 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 KCNV2Q8TDN2 545 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 EZH1Q92800 747 aaPredicted RBP7.68□□□□□ -1.18
PTPRF-210ENST00000463041 ZC3H10Q96K80 434 aaKnown RBP7.68□□□□□ -1.18
PTPRF-210ENST00000463041 CEP63Q96MT8 703 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 CDK5RAP1Q96SZ6 601 aaKnown RBP7.68□□□□□ -1.18
PTPRF-210ENST00000463041 SPHK2Q9NRA0 654 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 CLIC5Q9NZA1 410 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 WDR35Q9P2L0 1181 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 DNMT3LQ9UJW3 386 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 KIAA1257Q9ULG3 409 aa7.68□□□□□ -1.18
PTPRF-210ENST00000463041 DNAH14Q0VDD8 3507 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms