RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 UROC1Q96N76 676 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 PPP1R12CQ9BZL4 782 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.13■□□□□ 0.01
HDAC6-213ENST00000462730 TMEM161AQ9NX61 479 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 ZNF148Q9UQR1 794 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 A6NNZ2 444 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 DCDC2CA8MYV0 355 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 H0YGN5 161 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 CST8O60676 142 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 CPP00450 1065 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 HSPA8P11142 646 aaKnown RBP15.13■□□□□ 0.01
HDAC6-213ENST00000462730 ODC1P11926 461 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 IVDP26440 423 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 BRCC3P46736 316 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 PMS2P54278 862 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 CDH6P55285 790 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 CCL23P55773 120 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 TCTN1Q2MV58 587 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 TUBB8Q3ZCM7 444 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 TTC31Q49AM3 519 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-213ENST00000462730 NOMO2Q5JPE7 1267 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 CEP85LQ5SZL2 805 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 PAQR9Q6ZVX9 377 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 PRUNE1Q86TP1 453 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 PIGZQ86VD9 579 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 OR2W6PQ8NHA6 318 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 URGCPQ8TCY9 931 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 APBB2Q92870 758 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 CALN1Q9BXU9 219 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 NFS1Q9Y697 457 aa15.13■□□□□ 0.01
HDAC6-213ENST00000462730 MKI67P46013 3256 aaKnown RBP15.12■□□□□ 0.01
HDAC6-213ENST00000462730 F8W810 466 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 EIF3HO15372 352 aaKnown RBP eCLIP15.12■□□□□ 0.01
HDAC6-213ENST00000462730 CAPN15O75808 1086 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 ITGB1P05556 798 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 FAM200BP0CF97 657 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 COL6A1P12109 1028 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 ITIH2P19823 946 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 KLRC2P26717 231 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 PTPN9P43378 593 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 ITGA8P53708 1063 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 TLE2Q04725 743 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 ADIGQ0VDE8 80 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 KRT81Q14533 505 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 SKIDA1Q1XH10 827 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 SPDYCQ5MJ68 293 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 CD300LGQ6UXG3 332 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 PACS2Q86VP3 889 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 ZNF280BQ86YH2 543 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 ALLCQ8N6M5 410 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 CCDC89Q8N998 374 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 NKD2Q969F2 451 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-213ENST00000462730 KRT82Q9NSB4 513 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 TBC1D13Q9NVG8 400 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 GPATCH2LQ9NWQ4 482 aa15.12■□□□□ 0.01
HDAC6-213ENST00000462730 DRG1Q9Y295 367 aaKnown RBP15.12■□□□□ 0.01
HDAC6-213ENST00000462730 ENPP3O14638 875 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 BEST1O76090 585 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 DDHD2O94830 711 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 TFE3P19532 575 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-213ENST00000462730 CCT5P48643 541 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 GNGT1P63211 74 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 OTUD4Q01804 1114 aaKnown RBP15.11■□□□□ 0.01
HDAC6-213ENST00000462730 PLCB3Q01970 1234 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 DSC1Q08554 894 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 MMRN1Q13201 1228 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 OASLQ15646 514 aaKnown RBP15.11■□□□□ 0.01
HDAC6-213ENST00000462730 CLEC20AQ6ZU45 233 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 FAM35AQ86V20 835 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 CCDC25Q86WR0 208 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 TTC13Q8NBP0 860 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 ACTL9Q8TC94 416 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 ARMC5Q96C12 935 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 TOX2Q96NM4 488 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 ELAC1Q9H777 363 aaKnown RBP15.11■□□□□ 0.01
HDAC6-213ENST00000462730 SAE1Q9UBE0 346 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-213ENST00000462730 ANAPC5Q9UJX4 755 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 CDH9Q9ULB4 789 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 TP73O15350 636 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 CYP2C18P33260 490 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 ARSEP51690 589 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 HDAC4P56524 1084 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 MAP3K7CLP57077 242 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 CAV1Q03135 178 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 ZNF844Q08AG5 666 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 DPYSL3Q14195 570 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 BOLA3Q53S33 107 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 EFHC1Q5JVL4 640 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 C1orf53Q5VUE5 145 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 IZUMO3Q5VZ72 239 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 RHBDF2Q6PJF5 856 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 ARCQ7LC44 396 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 METTL23Q86XA0 190 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 SLC35B2Q8TB61 432 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 BCAS4Q8TDM0 211 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 TEKT4Q8WW24 435 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 NDRG1Q92597 394 aaKnown RBP15.11■□□□□ 0.01
HDAC6-213ENST00000462730 NCAPGQ9BPX3 1015 aa15.11■□□□□ 0.01
HDAC6-213ENST00000462730 SNRNP25Q9BV90 132 aaKnown RBP15.11■□□□□ 0.01
HDAC6-213ENST00000462730 FRMD8P1Q9BZ68 369 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms