RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 KLHDC7AQ5VTJ3 777 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 SMYD5Q6GMV2 418 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 TTC8Q8TAM2 541 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 RIN3Q8TB24 985 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 SHC3Q92529 594 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 SECISBP2LQ93073 1101 aaKnown RBP11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 MSANTD3Q96H12 275 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 ULBP1Q9BZM6 244 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 FOXQ1Q9C009 403 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 GTSE1Q9NYZ3 720 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 SIT1Q9Y3P8 196 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 USP3Q9Y6I4 520 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 COL4A2P08572 1712 aa11.14□□□□□ -0.63
TRAPPC12-213ENST00000461577 FAM170BA6NMN3 283 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 LGALS16A8MUM7 142 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 ARNTLO00327 626 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 NCAM2O15394 837 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 ZBED1O96006 694 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 ZNF18P17022 549 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 CD72P21854 359 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 ATP5C1P36542 298 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 PGFP49763 221 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 MLLT6P55198 1093 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 YWHAGP61981 247 aaKnown RBP eCLIP11.13□□□□□ -0.639e-7■■■■□ 23.9
TRAPPC12-213ENST00000461577 TPM4P67936 248 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 UBXN1Q04323 297 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 PTK2Q05397 1052 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 TNK2Q07912 1038 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 GOLGA8FQ08AF8 430 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 GOLGA8DPQ0D2H9 430 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 RUNX3Q13761 415 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 DRAP1Q14919 205 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 PKDCCQ504Y2 493 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 C10orf120Q5SQS8 335 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 TRIM68Q6AZZ1 485 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 C1orf228Q6PIY5 440 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 DHX40Q8IX18 779 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 CPA6Q8N4T0 437 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 TMEM105Q8N8V8 129 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 PJA1Q8NG27 643 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 OSCP1Q8WVF1 389 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 ZNF606Q8WXB4 792 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 KCTD13Q8WZ19 329 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 FAM3CQ92520 227 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 ATP2A3Q93084 1043 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 CDK5RAP1Q96SZ6 601 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 NELL2Q99435 816 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 FAM83CQ9BQN1 747 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 ZSWIM1Q9BR11 485 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 FUCA2Q9BTY2 467 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 EBF3Q9H4W6 596 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 NMUR1Q9HB89 426 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 LTB4R2Q9NPC1 389 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 CYLDQ9NQC7 956 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 CFAP97Q9P2B7 532 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 AJAP1Q9UKB5 411 aaPredicted RBP11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 NDRG2Q9UN36 371 aaKnown RBP11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 SH3BP1Q9Y3L3 701 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 FHOD1Q9Y613 1164 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 WNT6Q9Y6F9 365 aa11.13□□□□□ -0.63
TRAPPC12-213ENST00000461577 COL4A3Q01955 1670 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 TRIOO75962 3097 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 FOXN3O00409 490 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 PIK3R2O00459 728 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 SLC9A3R1O14745 358 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 PI15O43692 258 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 NFATC1O95644 943 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 TBX18O95935 607 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 DCNP07585 359 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 IRF1P10914 325 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 ARSAP15289 507 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 UCHL3P15374 230 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 SOX9P48436 509 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 BPIFB4P59827 614 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 ZXDBP98169 803 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 AMPD2Q01433 879 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 NR1H3Q13133 447 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 SYCP1Q15431 976 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 MEA1Q16626 185 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 ZSCAN23Q3MJ62 389 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 FILIP1LQ4L180 1135 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 BTBD8Q5XKL5 378 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 PM20D1Q6GTS8 502 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 PMF1Q6P1K2 205 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 DENND1BQ6P3S1 775 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 RSRC2Q7L4I2 434 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 SCD5Q86SK9 330 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 RALGPS2Q86X27 583 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 KIAA1958Q8N8K9 716 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 NEK11Q8NG66 645 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 SLC35F5Q8WV83 523 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 NDRG1Q92597 394 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 HSFY1Q96LI6 401 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 PRRX2Q99811 253 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 DDX23Q9BUQ8 820 aaKnown RBP11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 OSBPL6Q9BZF3 934 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 ACP6Q9NPH0 428 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 PLCB1Q9NQ66 1216 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 HPS4Q9NQG7 708 aa11.12□□□□□ -0.63
TRAPPC12-213ENST00000461577 CNGB3Q9NQW8 809 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms