RNA–Protein interactions for RNA: ENST00000461350.5

COPS7B-217, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 3,299 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-217ENST00000461350 CACNG4Q9UBN1 327 aa11.71□□□□□ -0.53
COPS7B-217ENST00000461350 USTQ9Y2C2 406 aa11.71□□□□□ -0.53
COPS7B-217ENST00000461350 TRPV2Q9Y5S1 764 aa11.71□□□□□ -0.53
COPS7B-217ENST00000461350 THSD7BQ9C0I4 1608 aa11.71□□□□□ -0.54
COPS7B-217ENST00000461350 HHATQ5VTY9 493 aa11.71□□□□□ -0.54
COPS7B-217ENST00000461350 APBB1IPQ7Z5R6 666 aaPredicted RBP11.71□□□□□ -0.54
COPS7B-217ENST00000461350 ITGA11Q9UKX5 1188 aa11.71□□□□□ -0.54
COPS7B-217ENST00000461350 ASMTLO95671 621 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 AXLP30530 894 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 RASSF2P50749 326 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 CCNG1P51959 295 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 ACLYP53396 1101 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 SESN3P58005 492 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 CENPCQ03188 943 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 ITGA7Q13683 1181 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 PKN2Q16513 984 aaKnown RBP11.7□□□□□ -0.54
COPS7B-217ENST00000461350 TRABD2AQ86V40 505 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 ELOVL4Q9GZR5 314 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 NOD1Q9Y239 953 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 SNX9Q9Y5X1 595 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 SMIM28A0A1B0GU29 152 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 EME2A4GXA9 379 aaPredicted RBP11.7□□□□□ -0.54
COPS7B-217ENST00000461350 TPBGLP0DKB5 382 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 GM2AP17900 193 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 CTCFP49711 727 aaPredicted RBP11.7□□□□□ -0.54
COPS7B-217ENST00000461350 AFF1P51825 1210 aaKnown RBP11.7□□□□□ -0.54
COPS7B-217ENST00000461350 SARNPP82979 210 aaKnown RBP11.7□□□□□ -0.54
COPS7B-217ENST00000461350 ALKAL1Q6UXT8 129 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 MON1BQ7L1V2 547 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 RNF180Q86T96 592 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 RSPH3Q86UC2 560 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 TTC8Q8TAM2 541 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 MAML1Q92585 1016 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 LPPQ93052 612 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 CFHR5Q9BXR6 569 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 SENP6Q9GZR1 1112 aaPredicted RBP11.7□□□□□ -0.54
COPS7B-217ENST00000461350 PLEKHA5Q9HAU0 1116 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 ENTPD5O75356 428 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 LINGO3P0C6S8 592 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 GNAZP19086 355 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 SOX4Q06945 474 aaPredicted RBP11.7□□□□□ -0.54
COPS7B-217ENST00000461350 PCBP1Q15365 356 aaKnown RBP eCLIP11.7□□□□□ -0.544e-7■■■■■ 40
COPS7B-217ENST00000461350 ZBTB6Q15916 424 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 TSNAXIP1Q2TAA8 658 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 DENND1BQ6P3S1 775 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 RIBC1Q8N443 379 aaPredicted RBP11.7□□□□□ -0.54
COPS7B-217ENST00000461350 PCSK9Q8NBP7 692 aaKnown RBP11.7□□□□□ -0.54
COPS7B-217ENST00000461350 SLC4A11Q8NBS3 891 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 SH3TC2Q8TF17 1288 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 INPP5DQ92835 1189 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 ANKRD27Q96NW4 1050 aa11.7□□□□□ -0.54
COPS7B-217ENST00000461350 HCRTO43612 131 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 IGFBP6P24592 240 aaPredicted RBP11.69□□□□□ -0.54
COPS7B-217ENST00000461350 CD52P31358 61 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 ATICP31939 592 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 RPA3P35244 121 aaPredicted RBP11.69□□□□□ -0.54
COPS7B-217ENST00000461350 NKX3-2P78367 333 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 NR1H3Q13133 447 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 MUM1Q2TAK8 710 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 KAZNQ674X7 775 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 WDTC1Q8N5D0 677 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 TEX9Q8N6V9 391 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
COPS7B-217ENST00000461350 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
COPS7B-217ENST00000461350 OSBPL8Q9BZF1 889 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 KLHL11Q9NVR0 708 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 CNTN3Q9P232 1028 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 ZFP69BQ9UJL9 534 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 FKTNO75072 461 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 NDST1P52848 882 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 MXRA7P84157 204 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 CCDC6Q16204 474 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 CCNG2Q16589 344 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 TAF1BQ53T94 588 aaPredicted RBP11.69□□□□□ -0.54
COPS7B-217ENST00000461350 CYP4A22Q5TCH4 519 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 ANO7Q6IWH7 933 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 BEST2Q8NFU1 509 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 TRPV6Q9H1D0 765 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 NPHS2Q9NP85 383 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 TJP2Q9UDY2 1190 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 NEU2Q9Y3R4 380 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 LRRC42Q9Y546 428 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 PTCH2Q9Y6C5 1203 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 RALGAPA2Q2PPJ7 1873 aa11.69□□□□□ -0.54
COPS7B-217ENST00000461350 LRRD1A4D1F6 860 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 WDR91A4D1P6 747 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 DPPA5A6NC42 116 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 EDF1O60869 148 aaKnown RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 CILPO75339 1184 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 MYBL1P10243 752 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 CST5P28325 142 aaPredicted RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 SLC1A1P43005 524 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 PTDSS1P48651 473 aaKnown RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 SEPT7Q16181 437 aaKnown RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 C9orf57Q5W0N0 161 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 TRIM72Q6ZMU5 477 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 C12orf29Q8N999 325 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 RNF169Q8NCN4 708 aa11.68□□□□□ -0.54
COPS7B-217ENST00000461350 SLC7A6OSQ96CW6 309 aaPredicted RBP11.68□□□□□ -0.54
COPS7B-217ENST00000461350 HEXIM2Q96MH2 286 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms