RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 CHD7Q9P2D1 2997 aa8.85□□□□□ -0.99
ECHDC1-212ENST00000461239 A0A1W2PQJ5 194 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 E9PMD0 336 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 BUB1BO60566 1050 aaPredicted RBP8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 CAND2O75155 1236 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 RFPL1O75677 317 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 DBHP09172 617 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 XRCC6P12956 609 aaKnown RBP eCLIP8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 SSTR4P31391 388 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 CCT6AP40227 531 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 MRPS6P82932 125 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 PPIGQ13427 754 aaKnown RBP eCLIP8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 LPIN1Q14693 890 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 TMEM266Q2M3C6 531 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 TMEM119Q4V9L6 283 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 FAM102BQ5T8I3 360 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 NXNQ6DKJ4 435 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 LILRA2Q8N149 483 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 NME8Q8N427 588 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 EVPLQ92817 2033 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 TNPO1Q92973 898 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 FAXDC2Q96IV6 333 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 EPSTI1Q96J88 318 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 ZNF668Q96K58 619 aaPredicted RBP8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 PPP1R16BQ96T49 567 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 CSRNP2Q9H175 543 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 TCF7L1Q9HCS4 588 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 LUC7LQ9NQ29 371 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 ANKEF1Q9NU02 776 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 MBNL3Q9NUK0 354 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 DDX19AQ9NUU7 478 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 LUC7L2Q9Y383 392 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 NOC2LQ9Y3T9 749 aaKnown RBP8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 PCDHB4Q9Y5E5 795 aa8.84□□□□□ -0.99
ECHDC1-212ENST00000461239 MYH15Q9Y2K3 1946 aa8.84□□□□□ -1
ECHDC1-212ENST00000461239 KDM3AQ9Y4C1 1321 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 TCRBV5S2A0A599 114 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 MAGEB2O15479 319 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 KDM1AO60341 852 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 DKC1O60832 514 aaKnown RBP eCLIP8.83□□□□□ -1
ECHDC1-212ENST00000461239 BMP15O95972 392 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 GHRP10912 638 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 PNLIPP16233 465 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 ZSCAN20P17040 1043 aaPredicted RBP8.83□□□□□ -1
ECHDC1-212ENST00000461239 MUTP22033 750 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 CD40P25942 277 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 RFC2P35250 354 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 LONP1P36776 959 aaKnown RBP8.83□□□□□ -1
ECHDC1-212ENST00000461239 GPR3P46089 330 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 FNTBP49356 437 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 GALK1P51570 392 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 GPC3P51654 580 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 SCAND1P57086 179 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 XKR9Q5GH70 373 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 FBXO47Q5MNV8 452 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 BTBD8Q5XKL5 378 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 FAM109BQ6ICB4 259 aaPredicted RBP8.83□□□□□ -1
ECHDC1-212ENST00000461239 OTOP2Q7RTS6 562 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 C14orf80Q86SX3 495 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 ZZZ3Q8IYH5 903 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 TCEAL8Q8IYN2 117 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 TDHQ8IZJ6 230 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 METTL13Q8N6R0 699 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 DBF4BQ8NFT6 615 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 JPH3Q8WXH2 748 aaPredicted RBP8.83□□□□□ -1
ECHDC1-212ENST00000461239 HERVK_113Q902F9 699 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 TMEM143Q96AN5 459 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 PLIN2Q99541 437 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 RXFP1Q9HBX9 757 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 POLD4Q9HCU8 107 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 BLOC1S4Q9NUP1 217 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 RIC8BQ9NVN3 520 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 IP6K2Q9UHH9 426 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 GPR160Q9UJ42 338 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 DBR1Q9UK59 544 aaKnown RBP8.83□□□□□ -1
ECHDC1-212ENST00000461239 RCOR1Q9UKL0 485 aa8.83□□□□□ -1
ECHDC1-212ENST00000461239 ACOT7O00154 380 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 SPTLC2O15270 562 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 PCDHGA12O60330 932 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 PPP6R2O75170 966 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 H2AFYO75367 372 aaKnown RBP8.82□□□□□ -1
ECHDC1-212ENST00000461239 CSDE1O75534 798 aaKnown RBP8.82□□□□□ -1
ECHDC1-212ENST00000461239 YEATS4O95619 227 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 FGBP02675 491 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 ARL2P36404 184 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 NLRP11P59045 1033 aaKnown RBP8.82□□□□□ -1
ECHDC1-212ENST00000461239 EMC2Q15006 297 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 KARSQ15046 597 aaKnown RBP8.82□□□□□ -1
ECHDC1-212ENST00000461239 KRT79Q5XKE5 535 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 HAUS3Q68CZ6 603 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 FRMD7Q6ZUT3 714 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 OTUD6AQ7L8S5 288 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 RTN4RL1Q86UN2 441 aaPredicted RBP8.82□□□□□ -1
ECHDC1-212ENST00000461239 ERMNQ8TAM6 284 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 PRPF31Q8WWY3 499 aaKnown RBP8.82□□□□□ -1
ECHDC1-212ENST00000461239 AK8Q96MA6 479 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 RAB34Q9BZG1 259 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 CCSER1Q9C0I3 900 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 BHMT2Q9H2M3 363 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 SUCLA2Q9P2R7 463 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms