RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 PPM1DO15297 605 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 PIP5K1CO60331 668 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 ONECUT2O95948 504 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 CYP2C9P11712 490 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 HSD3B1P14060 373 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 VIPR2P41587 438 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 GRK6P43250 576 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 SLC11A2P49281 568 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 TOB1P50616 345 aaPredicted RBP4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 ZNF134P52741 427 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 KRT17Q04695 432 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 SEMA5AQ13591 1074 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 RAB32Q13637 225 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 BOP1Q14137 746 aaKnown RBP4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 CERKLQ49MI3 558 aaPredicted RBP4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 ARHGAP40Q5TG30 622 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 VPS53Q5VIR6 699 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 RNF220Q5VTB9 566 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 JAKMIP3Q5VZ66 844 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 ICE2Q659A1 982 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 CYB5RLQ6IPT4 315 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 COL23A1Q86Y22 540 aaPredicted RBP4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 TMTC2Q8N394 836 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 LRRC71Q8N4P6 559 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 LRTOMTQ8WZ04 291 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 SUCLG2Q96I99 432 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 TBCBQ99426 244 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 WACQ9BTA9 647 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 CRB3Q9BUF7 120 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 MYLK2Q9H1R3 596 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 VPS16Q9H269 839 aa4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.24□□□□□ -1.73
SPTLC1-203ENST00000461132 CNTNAP2Q9UHC6 1331 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 RHPN2P1A8MT19 583 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 PRRT4C9JH25 899 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 H0YIZ8 118 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 SLC16A3O15427 465 aaKnown RBP4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 NPSP0C0P6 89 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 SLC5A1P13866 664 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 BRAFP15056 766 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 ENGP17813 658 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 RPL17P18621 184 aaKnown RBP4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 LRPAP1P30533 357 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 CHKAP35790 457 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 ARHGAP25P42331 645 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 MAPK9P45984 424 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 GEMIN4P57678 1058 aaKnown RBP4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 TBX2Q13207 712 aaPredicted RBP4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 CTBP1Q13363 440 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 LAMB3Q13751 1172 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 E2F2Q14209 437 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 POLD3Q15054 466 aaPredicted RBP4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 TRIP6Q15654 476 aaKnown RBP4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 MGAT5BQ3V5L5 792 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 ZNF260Q3ZCT1 412 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 RGS7BPQ6MZT1 257 aaPredicted RBP4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 NAPRTQ6XQN6 538 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 ANKRD18AQ8IVF6 992 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 KIAA0319LQ8IZA0 1049 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 KRT78Q8N1N4 520 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 NKAPQ8N5F7 415 aaKnown RBP4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 OR2C3Q8N628 320 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 IL31RAQ8NI17 732 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 SKA1Q96BD8 255 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 MPP4Q96JB8 637 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 TBATAQ96M53 351 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 ISCA1Q9BUE6 129 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 PTDSS2Q9BVG9 487 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 LRRC27Q9C0I9 530 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 MS4A7Q9GZW8 240 aaPredicted RBP4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 CERS4Q9HA82 394 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 SACM1LQ9NTJ5 587 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 C9orf78Q9NZ63 289 aaPredicted RBP4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 SERTAD3Q9UJW9 196 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 OGDHLQ9ULD0 1010 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 L1RE1Q9UN81 338 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 SNX13Q9Y5W8 968 aa4.23□□□□□ -1.73
SPTLC1-203ENST00000461132 TISP43B9A030 160 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 H3BNC9 293 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 EPB41L2O43491 1005 aaKnown RBP4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 PDHA1P08559 390 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 EN2P19622 333 aaPredicted RBP4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 PTMSP20962 102 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 PPIFP30405 207 aaKnown RBP4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 CLCN2P51788 898 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 PRKAG1P54619 331 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 SUMO3P55854 103 aaPredicted RBP4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 HOXA4Q00056 320 aaPredicted RBP4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 ICA1Q05084 483 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 DDX10Q13206 875 aaKnown RBP4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 RABEP1Q15276 862 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 DGKKQ5KSL6 1271 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 TREML2Q5T2D2 321 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 TTLL5Q6EMB2 1281 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 SWSAP1Q6NVH7 229 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 TECPR1Q7Z6L1 1165 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 RAPGEF4Q8WZA2 1011 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 GCC1Q96CN9 775 aa4.22□□□□□ -1.73
SPTLC1-203ENST00000461132 REPS1Q96D71 796 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms