RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 SMPD4Q9NXE4 827 aa21.1■□□□□ 0.97
SNAPC3-204ENST00000461041 NAGPAQ9UK23 515 aa21.1■□□□□ 0.97
SNAPC3-204ENST00000461041 TICRRQ7Z2Z1 1910 aa21.1■□□□□ 0.97
SNAPC3-204ENST00000461041 COL4A3Q01955 1670 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 LEFTY2O00292 366 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 TLR5O60602 858 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 CAVIN2O95810 425 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 ZBED1O96006 694 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 CLCN1P35523 988 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 PSEN1P49768 467 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 RGS7P49802 495 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 STARD6P59095 220 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 PTK2Q05397 1052 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 ADIGQ0VDE8 80 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 MEA1Q16626 185 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 CWF19L1Q69YN2 538 aaKnown RBP21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 PM20D1Q6GTS8 502 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 CC2D1AQ6P1N0 951 aaPredicted RBP21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 DENND1BQ6P3S1 775 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 LUZP1Q86V48 1076 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 SUGP1Q8IWZ8 645 aaKnown RBP21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 FLCNQ8NFG4 579 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 CSGALNACT1Q8TDX6 532 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 SHDQ96IW2 340 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 FAM83CQ9BQN1 747 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 STK33Q9BYT3 514 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 TBC1D17Q9HA65 648 aa21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 FAM207AQ9NSI2 230 aaPredicted RBP21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.09■□□□□ 0.97
SNAPC3-204ENST00000461041 GABBR2O75899 941 aa21.08■□□□□ 0.97
SNAPC3-204ENST00000461041 RARGP13631 454 aa21.08■□□□□ 0.97
SNAPC3-204ENST00000461041 GPD2P43304 727 aa21.08■□□□□ 0.97
SNAPC3-204ENST00000461041 TPRG1Q6ZUI0 275 aa21.08■□□□□ 0.97
SNAPC3-204ENST00000461041 SIX6OS1Q8N1H7 587 aa21.08■□□□□ 0.97
SNAPC3-204ENST00000461041 ZFRQ96KR1 1074 aaKnown RBP21.08■□□□□ 0.97
SNAPC3-204ENST00000461041 HSFY1Q96LI6 401 aa21.08■□□□□ 0.97
SNAPC3-204ENST00000461041 PCMTD1Q96MG8 357 aaPredicted RBP21.08■□□□□ 0.97
SNAPC3-204ENST00000461041 ERGIC2Q96RQ1 377 aa21.08■□□□□ 0.97
SNAPC3-204ENST00000461041 NACA2Q9H009 215 aa21.08■□□□□ 0.97
SNAPC3-204ENST00000461041 CLIC5Q9NZA1 410 aa21.08■□□□□ 0.97
SNAPC3-204ENST00000461041 STK25O00506 426 aa21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 EPHB6O15197 1021 aa21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 TBX18O95935 607 aa21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 LCP1P13796 627 aa21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 POLR2FP61218 127 aaKnown RBP21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 TNK2Q07912 1038 aa21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 TRIM68Q6AZZ1 485 aa21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 ASTLQ6HA08 431 aaPredicted RBP21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 BHLHA9Q7RTU4 235 aa21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 SLC47A2Q86VL8 602 aa21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 DDX42Q86XP3 938 aaKnown RBP eCLIP21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 ARHGAP18Q8N392 663 aa21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 OSCP1Q8WVF1 389 aa21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 NDRG1Q92597 394 aaKnown RBP21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 DDX23Q9BUQ8 820 aaKnown RBP21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 CNGB3Q9NQW8 809 aa21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 GTSE1Q9NYZ3 720 aa21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 PIAS3Q9Y6X2 628 aa21.07■□□□□ 0.96
SNAPC3-204ENST00000461041 F8VZ95 297 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 PIK3R2O00459 728 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 RALAP11233 206 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 ATP5C1P36542 298 aaKnown RBP21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 CLCN5P51795 746 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 VCPP55072 806 aaKnown RBP21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 BPIFB4P59827 614 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 YWHAGP61981 247 aaKnown RBP eCLIP21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 TPM4P67936 248 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 PDGFRLQ15198 375 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 SCML4Q8N228 414 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 ZNF276Q8N554 614 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 NEK11Q8NG66 645 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 TTC8Q8TAM2 541 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 EBF3Q9H4W6 596 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 NLRC4Q9NPP4 1024 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 RTN4Q9NQC3 1192 aaKnown RBP21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 HPS4Q9NQG7 708 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 DUS2Q9NX74 493 aaKnown RBP21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 CFAP97Q9P2B7 532 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 NUDT5Q9UKK9 219 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 PCDHGC3Q9UN70 934 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 DAAM1Q9Y4D1 1078 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 WNT6Q9Y6F9 365 aa21.06■□□□□ 0.96
SNAPC3-204ENST00000461041 SHISA7A6NL88 538 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 TEX33O43247 280 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 GLULP15104 373 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 ARSAP15289 507 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 CD72P21854 359 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 AVPR2P30518 371 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 IFNAR2P48551 515 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 RPL34P49207 117 aaKnown RBP21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 KPNA1P52294 538 aaPredicted RBP21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 MLLT6P55198 1093 aaPredicted RBP21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 DAOAP59103 153 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 RUNX3Q13761 415 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 ITPRIPL2Q3MIP1 535 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 FILIP1LQ4L180 1135 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 C10orf120Q5SQS8 335 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 KLHDC10Q6PID8 442 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 TADA2BQ86TJ2 420 aa21.05■□□□□ 0.96
SNAPC3-204ENST00000461041 KIAA1958Q8N8K9 716 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms